Populus trichocarpa (black cottonwood): 7494241
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Entry
7494241 CDS
T01077
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
pop04120
Ubiquitin mediated proteolysis
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7494241
04120 Ubiquitin mediated proteolysis
7494241
09126 Chromosome
03083 Polycomb repressive complex
7494241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7494241
04121 Ubiquitin system [BR:
pop04121
]
7494241
03036 Chromosome and associated proteins [BR:
pop03036
]
7494241
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
7494241
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
7494241
Cul7 complex
7494241
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
7494241
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
7494241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1_POZ
Skp1
Motif
Other DBs
NCBI-GeneID:
7494241
NCBI-ProteinID:
XP_002313704
UniProt:
B9HR50
LinkDB
All DBs
Position
9:10963685..10965426
Genome browser
AA seq
158 aa
AA seq
DB search
MSESKKITLKSSDGETFVVEEAVAVESQTIKHMIEDDCAENDIPLPNVTSKILAKVIEYC
KKHVEADADKDATITGKDEFMKSWDAEFVKVDKNTLFDLILAANYLNIKDLLDLTCQAAA
DMIKGKTPDEIRKIFNIKNDFTPEEEEEIRRDNQWAFK
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcaaagaaaatcacgctaaaatcctccgacggcgagacattcgttgtcgaa
gaagcggtcgccgttgagtcacagaccatcaaacatatgattgaagatgattgcgccgaa
aatgacatcccgttgcctaatgtgacaagcaagattcttgctaaggttatcgagtactgc
aagaaacatgtggaagctgatgctgataaagatgcaactattactggaaaggatgagttt
atgaagagttgggatgccgagttcgtcaaagttgacaaaaacaccctctttgacctcatc
ttggcagcgaactatctgaacatcaaggatttgctagatctgacctgccaagctgcggct
gacatgatcaaggggaagactccagacgagatccgtaagatatttaacatcaagaatgac
ttcactccagaggaagaagaggagatccgcagagacaaccagtgggcatttaagtga
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integrated database retrieval system