Populus trichocarpa (black cottonwood): 7494248 Help Entry 7494248           CDS       T01077                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     7494248  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pop04121]     7494248 Enzymes [BR:pop01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      7494248 Ubiquitin system [BR:pop04121]  Ubiquitin ligases (E3)   HECT type E3    7494248 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT ARM_ARMC5 Arm TFIIA HEAT_EZ Motif Other DBs NCBI-GeneID:  7494248 NCBI-ProteinID:  XP_024464427 LinkDB All DBs Position 9:10876724..10886764 Genome browser AA seq 1895 aa AA seqDB search METRSRKRAEASSSAATNTTGTTTRSNKRSRTNAATATATTTTATATRSRSTRAHPLPMD STPVESSSSSRSRRNRNNNSNSESEKGKEKEHEVRVSRENREITNNLDSGNDNNNPNVDD DDDDDSEGGGIAAFHQNLTSASSALQGLLRKLGAGLDDLLPSPVMGSGSSSHQSGRLKKI LSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNNESNPDIMLLA ARAITHLCDVLPSSCAAVVHYGAVSCFVARLITIEYMDLAEQSLQALKKISQEHPTACLR AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVL EHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTPTYTGLIRL LSTCASGSPLGAKTLLLLGVSGILKEILSGSGVSANSPVPPALSRPADQIFEIVNLANEL LPPLPQGTISLPTSSSMLVKGSVVKKCPSSSSGKQDDINGNVPEVSAREKLLNDQPELLQ QFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMHFSNAEMIQSLLSMTNISSFLAGVLA WKDPHVLVPALQVAEILMEKLPGTFSKIFVREGVVYAVDQLILAGNPNTAPTHGSSAEKD NESVPGTSSRSRRYKRRSGSSNPEANSSEESKNPISANAGSPPSSIEIPMVNSNLRMAVS ACAKAFRDKYFPSDPGAAEDGVTDDLLHLKNLCTKLNAGVDDQKTKAKGKSKASASRLID SSTNKEEYLIGVISEMLAELGKGDGVSTFEFIGSGVVATLLNFFSCGYSTKEKISEANLP KLRQQALRRFKSFAILALPSSIDEGGAAPMAVLVQKLQNALSSLERFPVVLSHSSRSSSG GARLSSGLSALSQPFKLRLCRAQGEKALRDYSSNVVLIDPLASLAAVEEFLWPRVQRSET GHKASASAGNSESGNAQPGAGASSPSTSIPASATRRHSSRSRSSVNIGDSARKEPIPEKS TSTSTSKGKGKAVLKPPLEETKGPQTRNAARRRAAIDKDAQMKPVHGDSSSEDEELDISP VEIDDALVIEDDDISDDDDDDDDDHEDVLRDDSLPVCMPEKVHDVKLGAASEDSNVAPPA SDSQSNPASGSSSRAVAVRGSDSTDFRSGSSYGSRGAMSFAAAAMAGLGSANGRGIRGGR DRQGRPLFGSSSDPPKLIFTAAGKQLNRHLTIYQAIQRQLVLEEDDEDRYGGRDFISSDG SRLWSDIYTLTYQRADGQADRASVGGPSSSASKSIKGGSSNSNSDTQVHRMSLLDSILQA DLPCDLEKSNPTYNILALLRILEGLNQLAPRLRVQLVSDNFSEGKISSLDELMTATGVRV PAEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGL SRALYRLQQQQGADGHGSANEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLE VEYFGEVGTGLGPTLEFYTLLSHDLQKVTLGMWRSNSAAEKPSMEIDGDDDKNGKSNNES GTAVAADLVQTPLGLFPRPWPPTASASEGSQIYKTIEYFRLVGRVMAKALQDGRLLDLPL SMAFYKLVLGQELDLYDILSFDAEFGKTLQELHALVCRKHYLESIGSDHEAIADLHFHGT PIEDLCLDFTLPGYPDYILKPGDETVDINNLEEFISLVVDATVKTGITRQMEAFREGFNQ VFDISSLQIFTPQELDYLLCGRRELWEPDTLVDHIKFDHGYTAKSPAIVNLLEIMGEFTP DQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSAGNAMPNGTGPSESADDDLPSVM TCANYLKLPPYSTKEVMYKKLLYAISEGQGSFDLS NT seq 5688 nt NT seq  +upstreamnt  +downstreamnt atggaaactcgtagccggaaacgggcggaggcctcctcatctgccgccaccaacaccacc ggtaccactactcgctccaacaaacgatcccgcaccaacgctgccaccgcaacagcaacg acaacaaccgccaccgctacccgctctcgctccacacgtgctcaccctctccccatggac tctacacctgttgaatcgtcttcttcttctcgctcgcgtcggaataggaacaataatagc aatagtgaatcggagaaaggcaaagagaaagaacatgaagttagggtttcgcgtgaaaat agggaaatcactaataatttggattctggaaatgacaacaataaccctaatgtcgatgac gacgatgatgatgacagcgaaggcggtggaattgctgctttccatcagaatttgacttca gctagtagtgctttacagggtttgttgagaaagttgggtgccggtcttgatgatttactg ccttctccagtgatgggttcaggttcaagctcgcatcaatcagggagattgaagaagatt ttgtctgggttaagggcggatggagaagaagggaagcaagtggaagctttaacgcagctt tgtgaaatgctttctatcgggactgaagagagtctgagtactttttctgtggattccttt gttccggttcttgttgggttgttgaataatgagagtaatcctgatattatgttgcttgct gcaagggcgattacgcatttgtgtgatgtcttgccttcgtcttgtgctgctgttgttcat tatggcgctgtttcgtgttttgttgcaaggttgattactattgagtacatggaccttgct gaacagtctctgcaagctctaaagaagatatctcaagagcacccaactgcatgtctgcgt gccggtgctcttatggcagtgctttcttatcttgattttttttctactggagttcagcga gtagcattatctactgctgcaaatatgtgcaagaaacttccttcagatgcagctgacttt gtgatggaagcagttcctctgttgaccaaccttcttcagtaccatgatgccaaggtttta gagcacgcttcagtttgtttgacaaggattgctgaagcctttgcctcatctccagacaaa ttagatgaactgtgtaatcatggacttgtcacacaagctgcctctctcatttccactagc agttccggcggtggacaggcttctctcagcactccaacatatacgggtttaattcgactg ctatccacttgtgcaagtgggtctcctttaggagccaaaacattacttcttcttggtgtc agtggcattcttaaagagatactatcaggttccggggtttctgctaactcccctgttcct cctgctctaagtcgacctgcagatcagatttttgagattgtcaatctggcaaatgagctt cttcctccgcttccacaaggaactatctctctcccaaccagctctagtatgttggtcaaa ggatctgttgtgaagaagtgtccttccagtagttctgggaaacaagatgacatcaatgga aatgttcctgaggtctcagctcgtgagaaattattaaatgatcaaccagaacttctgcag caatttggaatggaccttcttcctgttctgatacagatttatggttccagtgtcaacagt cctgttcgccacaagtgtctctcagttattgggaagttgatgcacttcagcaatgcagag atgattcagtctctacttagcatgacaaacatatcaagtttcctagctggggtgttagca tggaaagatccacatgtcttggttcctgcccttcaagtagccgagattcttatggaaaaa cttcctgggactttctccaagatttttgtcagagaaggtgtggtttatgctgtagatcaa cttatcttagctggaaacccaaatactgctcctacccatggttcttctgctgaaaaggat aatgagtctgttcctggaacttcgtcacgttccaggcgttacaaacgtcgcagtgggagc tcaaatcctgaagcaaattcatctgaagaatccaaaaatcctatttctgcaaatgctggc tcacctccaagttctatagaaatcccaatggtcaattcaaatttgcgaatggcagtcagt gcatgtgctaaagctttcagagataagtacttcccctcagatcccggggctgctgaagac ggggttactgatgaccttttacacttgaagaatctctgcacaaagttgaatgctggtgtt gatgaccaaaagactaaagcaaagggaaaatcaaaggcttctgcatcccgtcttattgac agctccacaaataaggaagagtacttgattggggtgatatccgagatgctagcagagctt ggcaaaggggatggtgtatccacttttgagtttattggaagtggtgttgtggcaaccttg ctgaattttttttcttgtggctattctaccaaggagaaaatttcagaagctaacctgcca aagcttcggcaacaagcacttagaagatttaagtcatttgctattctggcccttccttcc agcattgatgaagggggtgcggcacccatggcagtcttagttcagaagcttcaaaatgct ttgtcatccttggagcgttttcctgttgttctgagccattcttctaggtcatctagtgga ggtgcacgcctgtcttctggattaagtgcactatctcaaccttttaagttgcgtctctgt cgggcccaaggggaaaaggctctccgtgattactcttccaatgttgtacttattgatcca ttagcaagtttagctgctgtagaagaatttctttggccgcgagtgcagcgaagtgaaact ggtcacaaggcttcagcatctgcaggaaactctgaatctgggaatgcacagcctggagct ggtgcatcatctccatctacctctatccctgcttctgctactcgtcgtcattcttcaaga tccagatcatctgttaatataggagattcagctagaaaggaaccgataccagagaaaagc acaagcacaagcacatcaaagggaaagggcaaagctgttttgaaaccacccctggaggag acgaaaggacctcaaactagaaatgctgctcgtagaagagcagccattgataaagatgca caaatgaaaccagtgcatggggattctagttccgaggatgaggaattggatatatctcct gttgagatcgatgatgcattggtgattgaagatgatgacatctctgatgatgatgatgat gatgatgatgaccatgaagatgtgttaagagatgattctcttcctgtttgcatgcctgaa aaggtacatgatgtgaaactgggtgctgcatcagaggatagcaatgttgcaccaccagca agtgacagccaaagtaatcctgcttctggttctagtagcagggctgttgctgttaggggc tcggattccactgattttaggagtggtagttcttatggatctaggggagctatgtcattt gccgccgctgccatggctgggcttggatctgctaatggcagaggcatcaggggaggaaga gatcgacaaggacgtcccttgtttggtagctctagtgaccctccaaagttaatctttact gctgctgggaagcaactaaataggcatttgacaatctatcaggccatccagcgacaactt gttctggaagaggatgatgaagacaggtacggtggcagggattttatctccagcgatggg agtaggctttggagtgatatatatacccttacatatcaaagggcagatggccaagctgat agggcttctgttgggggcccaagttctagtgcatcaaagtctatcaaaggtggctcttcc aattcaaactcagatacccaagtgcaccgcatgtcacttttagatagcatcttgcaagcg gaccttccttgtgatttggaaaaatctaatcctacttataatatattggctctactacgt atacttgagggtttgaaccagcttgctcctcgtctgagagttcagctagtttctgacaac ttttctgaggggaaaatctcaagcttggatgagttgatgactgctactggtgtcagggtt cctgctgaagaattcataaatagcaagctcacacctaaattagctcgacaaattcaagat gcccttgctctgtgcagtgggagccttccgtcatggtgttatcaattaacaaaagcatgc ccattcctgttcccttttgagacccggcgacaatacttctattcaactgcttttggatta tcccgtgctttgtatcgtcttcagcagcagcagggggctgatggtcatggatcagcgaat gaaagagaggtgagggttggaagattacaacgccagaaagttcgtgtgtcccgaaaccgt attttggattctgctgcaaaagtaatggagatgtattctagccagaaggctgtgcttgaa gtagaatattttggtgaggttggcacagggttgggtcctaccttagagttctacacgctt ttgagtcacgatcttcagaaagtcactcttggaatgtggaggtcaaattcagcagcagag aaaccttcaatggaaattgatggagatgatgacaaaaatggaaaatccaataatgaatct ggtactgctgttgctgcagatcttgtccagactccacttggtttattccctcgtccttgg ccaccaactgctagtgcttctgaggggagccaaatatataagaccattgagtatttccgg ctggttggacgggtgatggccaaagctcttcaagatggacggcttttggacctaccactt tcgatggcattttataagcttgtgcttggtcaagaacttgatctgtatgatattctttcg tttgatgctgaatttgggaagactttacaagaattgcatgcccttgtttgtcggaaacat tatctagaatcaatagggagtgatcatgaagccattgctgatttacattttcatgggacc ccgatagaagatctctgcttggattttactcttccgggttatccagactacattttgaag ccaggagatgaaactgtcgatatcaataacttggaggaattcatatccttggtagttgac gcaactgtcaagactgggattacgcgacaaatggaagcatttagagaggggttcaatcag gtttttgacatctcctcattgcaaatattcactccacaagaattggattatttgctttgc ggtcgcagagagttgtgggagcctgatacacttgttgatcatataaaatttgatcatgga tacactgccaagagtccagccattgttaacctgcttgagattatgggagagttcacaccg gatcagcagcgtgcattctgccagtttgttactggggcacccaggctaccacctggaggt ctggctgtcctaaacccaaaattaaccattgtgagaaagcattcttcatctgcagggaat gcaatgccaaatggaactggaccttcagaatcagctgatgatgacttgcctagtgtcatg acttgtgctaattacctaaagcttcctccttactctaccaaggaagttatgtacaagaaa ttgctgtacgcaatcagtgaagggcagggatcttttgatctgtcatga

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