Populus trichocarpa (black cottonwood): 7494288
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Entry
7494288 CDS
T01077
Name
(RefSeq) transcription initiation factor TFIID subunit 14b isoform X1
KO
K11341
YEATS domain-containing protein 4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7494288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7494288
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
7494288
NuA4 complex
7494288
Chromatin remodeling factors
SRCAP complex
7494288
SWR1 complex
7494288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YEATS
pYEATS
Motif
Other DBs
NCBI-GeneID:
7494288
NCBI-ProteinID:
XP_006379267
UniProt:
U5G438
LinkDB
All DBs
Position
9:complement(10471024..10474535)
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AA seq
250 aa
AA seq
DB search
MSKPEENTEKKESAQILNKKLKDVEISIPIVYGNIAFWLGKKSNEYQSHKWTIYVRGATN
EDLGVVIKRAVFQLHSSFNNPTRVIEAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLY
HHLKLYPEDEPGPVSMKKPVVVESYDEIVFPEPSEGFLARVQSHPAVNLPRLPAGFTLPP
PMPVEDTSKRKRGDTKDNPLAQWFMKFSEADKLLQLAAARQQVQAHIAKLRRQISLINGQ
DQHLKSPSNQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacctgaagagaacactgaaaagaaggaatcggcacagattttgaacaagaag
ctcaaagatgtcgaaatcagcattccaatagtttatggcaacatagcattctggcttgga
aaaaagtctaacgagtatcaatctcataagtggactatatatgtacgtggggccactaac
gaggatcttggtgtagtgataaagcgagctgtttttcagcttcattctagtttcaataat
cctacaagagtcattgaggcacctccttttgagttatcagaagcaggctggggtgaattt
gagattgccattacactgtattttcacagtgatgtgtgtgataagcctttgaacctatat
catcatttgaagttgtacccagaagatgaacctggccctgtgtcaatgaagaagccagtt
gttgtagaatcatatgatgagatcgtattcccggagccttcagagggtttcttagctcgt
gtacagagtcatccagctgtaaatctacccagattacctgctggttttactttgcctcct
cctatgccggttgaagatacaagtaaaaggaagagaggagacactaaagataatcctcta
gcccagtggtttatgaaattctctgaagcagataagctgctgcagcttgctgcagctcgt
cagcaggtgcaggctcatatagcaaaactccgacggcaaataagcttgataaatgggcag
gatcaacatttgaaatctccctccaaccagtga
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