KEGG   Populus trichocarpa (black cottonwood): 7494292
Entry
7494292           CDS       T01077                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pop03016]
    7494292
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     7494292
Transfer RNA biogenesis [BR:pop03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    7494292
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 CCDC106
Other DBs
NCBI-GeneID: 7494292
NCBI-ProteinID: XP_002313751
UniProt: B9HRE5
LinkDB
Position
9:10430479..10434267
AA seq 704 aa
MAESPAGLTSQNWNPTQDQQQPTATPEQLIAKSIAPVKPQFLRPPPSRASQKDTTSSTVS
DSNNDISKSINTNTTSVVAKEKKSKRQLKRERQQEKKSSVNLCPELAKTGDVNSCPYKNN
CRFNHDLEAFKAQKPEDLEGECPFVNGEGSCCPYGLACRFYGTHKGRDGVRNGKKQISEI
NGLNKDVQKLLWKNKMKFLKADSVLKSLGLTGPGKSKVKKVDEEEVEKVVDDNDSHGTND
TNENGCGDGGNESAGKLDCAAEVLGGDDMDGVLTDEVRPQKKAKSAVEVNGCSGEEVNGL
GIPEKDIENNCPLKTEPELVSDKLEVIADSVETDGSLKLHPREKKLIDFRGKLYLAPLTT
VGNLPFRRVCKALGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTV
TRTVELIDQECTVDFIDINMGCPIDIVVNKGAGSSLLTKPMRMKSIIEATSGTVEKPITV
KVRTGYFEGKSRIDSLIVDIGKWGASAVTIHGRSRQQRYSKLADWDYIYQCARKAPDSLQ
VLGNGDVFSFVDWNNHKSDCPELSSCMIARGALIKPWIFTEIKEQRHWDISSGERLNILK
DYVRSGLEHWGSDTKGVETTRHFLLEWLSYTCRYVPVGLLDVIPQRLNWRPPSYYGRDDL
ETLMASDSAADWVRISEMLLGKVPDAFTFAPKHKSNAYDRAENG
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggccgagtcaccggcgggacttacctcccaaaactggaatccaactcaggaccagcaa
caaccaacagcaacaccagaacaactcatcgccaaatccatagctccagtgaaaccacaa
ttcctccgtcctccaccttctcgcgcctcccaaaaagataccacgtcatccaccgtttcc
gattctaataatgatatctcaaaatctattaacactaacactaccagtgtagtggccaag
gagaagaagtccaaacgacaactcaaacgtgaacgccagcaggaaaagaaatcctcagtg
aatctctgccctgaattagctaaaaccggagatgttaattcatgtccgtataaaaataac
tgccggttcaatcatgacttagaagcattcaaggctcagaaaccggaggatttagaggga
gagtgtccgttcgtaaacggggaagggtcgtgctgtccttatggattagcttgtagattt
tacggaactcataagggtcgtgatggtgttagaaatggtaaaaagcaaatttcggagatt
aatgggttgaataaggatgttcaaaagcttttgtggaagaataaaatgaagtttctgaag
gcggattctgtactcaagtctcttgggcttacgggtccgggtaagtcgaaagtgaaaaaa
gtggacgaggaggaagttgagaaagttgttgatgataatgactctcatggcactaatgac
actaatgagaatggctgtggtgacgggggcaatgagtcagctggtaaattagattgcgct
gcagaagtgcttggtggtgatgatatggatggagtactaactgatgaagttaggccccag
aagaaagcaaaatcagctgttgaagtaaatggttgctctggcgaagaagtcaatggattg
ggtatcccagagaaagatattgagaataactgccctctcaaaacagaaccagaacttgta
tctgataaactagaagtcatagctgatagtgtagaaactgatggaagtttaaaattacac
ccacgtgaaaaaaagcttatcgacttcagaggaaagttgtaccttgctcctttgaccact
gttggaaatcttccttttcgaagagtctgtaaagctttgggagctgatgttacttgcggt
gaaatggcaatgtgcacaaatctattgcagggtcaagcttcagaatgggcactgctgaga
cgtcattcatctgaggatttatttggtgttcaaatatgtggggcttatccagatacagtt
acacgtactgttgagcttatagatcaggaatgcacagtggacttcattgatataaatatg
ggctgccccatcgatattgttgttaacaagggtgctgggtcatctcttcttacaaaacca
atgcggatgaaaagcattatagaagccacttctggtacagtggaaaagcctataactgtc
aaggtgcggacaggttattttgaaggaaaaagccgtattgactcattaattgtggatatt
ggaaaatggggtgccagtgctgtaacaattcatggtcgatcacgtcagcaacgctatagc
aagcttgctgattgggactacatataccaatgtgctagaaaggccccagattctctgcaa
gttctaggaaatggggatgtcttttcattcgttgattggaacaatcacaaatctgactgc
cctgagctttcttcatgcatgatagctagaggtgcactaattaagccttggatatttact
gaaatcaaggaacagaggcactgggacataagttccggagagcgattgaacattctaaag
gattatgtgcgttctggcctagaacattggggctctgacacaaaaggagtggagacaact
aggcatttcttgttggagtggctaagctacacatgcagatatgtaccggtaggtctctta
gatgtcattccacagcggctcaactggcgtccaccctcatactatggtcgtgatgacctt
gaaacgctcatggcttctgattctgctgctgactgggtacgtatctctgaaatgttgctt
ggcaaagttccggatgcctttacatttgcaccgaagcataaatcaaatgcctatgaccga
gcagagaatggctaa

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