Populus trichocarpa (black cottonwood): 7494294
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Entry
7494294 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7494294 isoform X2
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7494294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7494294
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
7494294
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Ortholog
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GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
AstA_C
Motif
Other DBs
NCBI-GeneID:
7494294
NCBI-ProteinID:
XP_006379263
UniProt:
B9HRF2
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All DBs
Position
9:complement(10394790..10398481)
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AA seq
323 aa
AA seq
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MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQ
NDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTK
DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
FAPPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPAS
SSSVSKDKQPAVADGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQ
EQPEKKEEPKFQAFTGKKYSLKG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgatggatatggataccacgggacatcgtttgagcagacatatcgatgttac
cctgcttcatttattgaaaagccacaaattgagagtggtgataaaattataatgcctccc
tcagctcttgaccgtcttgcatccctgcatatcgattatccaatgttgtttgagcttcag
aatgatgctgctgagcgggtttctcactgtggagttctggagtttattgcagaggaaggc
atgatttatatgccatactggatgatggagaacctgcttctacaagagggagatacagtg
cgagtgaaaaatgttactcttccaaagggaaaatatgttaaattgcagcctcacacaaag
gactttttggatatatccaacccaaaagctatcttagagacaacattaaggaattattcc
tgcttaaccaccggggatagtattatggtggcctataacaacaagaaatactacatagat
atcatagaaacaaaaccttcaaatgcaataagtatcattgagacagactgtgaagtggac
tttgcacctcccctagattacaaggagcctgaaaagcctgttgcatctgttccaccaagc
aaggcaacctcccaagctgaagaggttccagctgagaccgaaccaaaatttaatcccttt
acaggagcaggaagacgcttggatgggaaacctttgagctatcagcccccaccagcatcg
tcttcatcagtgtctaaagacaagcaacctgctgtcgccgatggcagtaggcagccatct
ctggggtctagctcacaaaatactgcacgcaagtctcagggaaagcttgtgttcgggtcc
aatacaggtcgcactcctaaggaaacacagagggaggaatctggaaaagagaccaagcaa
gagcagcctgaaaagaaagaagagccaaaattccaggcattcactgggaagaagtactca
ttgaaaggttga
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