Populus trichocarpa (black cottonwood): 7494518
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Entry
7494518 CDS
T01077
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00250
Alanine, aspartate and glutamate metabolism
pop00410
beta-Alanine metabolism
pop00430
Taurine and hypotaurine metabolism
pop00650
Butanoate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
7494518
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
7494518
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
7494518
00430 Taurine and hypotaurine metabolism
7494518
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
7494518
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GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
7494518
NCBI-ProteinID:
XP_002305927
UniProt:
B9H3K1
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Position
4:6255708..6259872
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AA seq
498 aa
AA seq
DB search
MVLSKTASESDVSVHSTFASRYVRASLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG
VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
VKLSDGYYVMDPEKAVQMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKSTGWDTP
IHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKQGLEK
TGKFNIVSKDNGVPLVAFSLKDNSLHNEFEVSDMLRRFGWIVPAYTMPPDAQHVTVLRVV
IREDFSRTLAERLVIDIGKVLHELETLPSRISAKIVLANEEKDAVADKDKKDVQKETREI
ITAWRKLVIQRKKMNGVC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggttctctccaagacagcttcagaatctgatgtctccgttcactcaacgtttgcctct
agatatgttcgagcttcacttcccaggttcaagatgccagagaactcgatcccgaaggag
gcagcctttcagatcataaacgatgagctcatgctggatggaaaccctaggctgaaccta
gcatcgtttgtgacgacatggatggagcctgaatgtgacaagcttatcatggcttctatc
aacaaaaactacgtcgacatggatgaataccctgtcaccactgagcttcagaatcgatgc
gttaacatgatagcccatctcttcaatgctccacttggagactcagagacagcggtagga
gtaggaactgttggatcttctgaggctataatgttggctggtttggcattcaagaggaag
tggcaaaacaagagaaaagctgagggaaagccttacgataagcctaacattgtcacggga
gccaatgttcaggtatgttgggagaaatttgcaaggtactttgaggtggagttgaaggag
gtgaagcttagtgatggctattatgtgatggatcctgagaaagcagtgcaaatggtggat
gagaacacaatctgtgttgcagctattcttggttccactcttaatggagaatttgaagat
gtcaagctcttgaatgatctcctggtggagaagaacaaatcaacaggttgggatactccg
atccatgtcgatgcggccagcggtggcttcattgcaccttttatatacccggagctcgag
tgggatttccggttgccattggtgaagagtatcaatgtcagtgggcacaaatatggacta
gtctatgctggtattggatgggtcatttggaggaacaaggaggacttgcctgaagaactt
atcttccatatcaattatcttggagctgatcaaccaaccttcacccttaacttctccaaa
ggatctagtcaagttattgctcaatattaccaactcattcggttgggttacgagggatac
agaaatgtcatggaaaattgtagagacaacatgctggtactcaaacaaggactagagaag
acaggcaagttcaacattgtttcgaaagacaatggggtgccactggtggccttttctttg
aaggacaatagcttgcacaacgaatttgaggtgtccgacatgttaaggcgttttggttgg
attgtgcctgcctacaccatgcctcctgatgctcaacatgttactgtgttgcgcgtcgta
attcgagaagatttttctcggacactcgctgagcgtcttgtcattgacattggcaaggtt
ctacatgagcttgagacattgccatccaggatcagtgccaagattgtgttggctaatgaa
gagaaggatgccgtggccgataaagacaagaaggacgtccagaaagaaacaagagagatt
attacagcttggaggaagcttgtcattcaaaggaagaagatgaatggtgtttgctag
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