Populus trichocarpa (black cottonwood): 7494525
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Entry
7494525 CDS
T01077
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7494525
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
7494525
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
7494525
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Motif
Pfam:
PRORP
PPR_long
PPR_2
RNase_Zc3h12a
TPR_24
PPR_3
PPR_1
Motif
Other DBs
NCBI-GeneID:
7494525
NCBI-ProteinID:
XP_002305261
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Position
4:complement(6168557..6173112)
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AA seq
581 aa
AA seq
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MLLCRSSTFFAPSFNAKTSQNFCSYFTKKTHLLSFFKNSPICCNHSYLFAKHIKDSNFIG
AHNLFMKKKATFCNSAISATSQSDEKAVGGNVVSKRLKKKARRDAPEGVLRFKLDMCSKV
GDVVEGLRLYDEARRNGVELNQHHYNVMLYLCSQNRGENGSDLKLACKRGFEIFQQMIID
KVPPNEATFTNAARLASVMEDPEMAFDLVKQMKGFGIMPKLRSYGPPLFGFCKKGMVDKA
YEVDAHMIESGVVAEEPELSSLLKLSADVNNADKMYELLHRLRTSVRQVMESTVGVIEDW
FKSEHAAKIGKGDWDVIKVKEGVVRGGGGWHGQGWLGHGQWRVVRTQMDKKGVCGSCGER
LACIDIDPRETENFAISLSKLAFGREVKADFIQFQEWLQQHGPFDAVVDGANVSLINQQT
FNFSQLNNVVNRLHDMSPSKKFPLVILHKSRVNGGPAQSPYNKKLLERWKNSGALYATPA
GSNDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALHM
PPPYSIVIQESENGGWHVPTTTGDDLETPRQWLCATRPVKR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgtagaagcagtactttttttgcaccttcttttaatgcaaaaacctctcaa
aatttttgctcttacttcactaagaaaacccatttgctttcattctttaagaatagcccc
atctgctgtaatcatagttatttatttgcaaaacacataaaggattcaaactttattgga
gcccataatttgttcatgaagaaaaaggccacattttgcaactcggcaatctctgcgaca
tcgcagagtgatgagaaagctgtgggtgggaatgtagtttctaaaaggttgaaaaagaaa
gcgcggcgagatgcgccagagggagtgcttaggtttaagctagatatgtgttcgaaagtt
ggcgatgttgttgaagggcttaggttgtatgatgaggcaaggaggaatggggttgagctt
aatcaacaccattataatgtgatgctttatttgtgctctcaaaatagaggtgaaaatgga
agtgatttgaagttggcttgtaaaaggggtttcgagatatttcagcagatgattattgat
aaagttcctcctaacgaggctacatttacaaatgcggcaaggttggcttctgtaatggaa
gatccagaaatggcttttgatttggtaaagcaaatgaagggttttggtattatgccgaag
ctgaggtcttatggtccacctttgtttggattttgtaagaaagggatggttgataaagct
tatgaagttgatgcacatatgattgaatctggggttgtggctgaagagcctgagctttcc
tctcttttgaaacttagtgctgatgtaaacaatgctgacaagatgtatgaattgctgcat
cggttgcgaacctctgtgaggcaggttatggagtcaactgtaggggttattgaagattgg
ttcaagtctgagcatgctgcaaaaattgggaagggggattgggatgtgattaaggtgaag
gaaggagttgtaaggggagggggaggttggcatggacaagggtggttagggcatggacag
tggagagtggtcaggactcaaatggataagaagggtgtttgtggttcttgtggtgagaga
cttgcttgtattgatatcgatccaagagagacagaaaactttgctatctcattatctaag
ttggcttttggaagagaggttaaggctgattttattcagttccaggagtggctgcagcag
catggtccatttgatgcagttgtagatggagctaatgttagtcttatcaatcaacagact
ttcaacttttcccagcttaataatgttgtaaatcgattacatgatatgagtccatccaag
aaatttccactagttattttgcacaaaagtcgtgtaaatgggggtccagctcagagtcct
tataacaagaaattgctagagaggtggaaaaattctggtgcactttatgctactccggct
ggttccaatgatgattggtactggttatatgctgctgttagttgcaagtgtttactggtg
acaaatgatgaaatgagggaccacttgttccagttgctagggacttccttttttccaaga
tggaaggaaaagcatcaggttcggctctcggtatcacgatctggaattgctctgcacatg
cctccgccgtattcaattgttattcaggaatcagaaaatggtggttggcatgtcccaaca
accacaggcgatgatcttgagactccaagacagtggttgtgtgccacccgacctgtcaaa
agatga
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