Populus trichocarpa (black cottonwood): 7494553
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Entry
7494553 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7494553 isoform X1
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7494553
Spliceosome [BR:
pop03041
]
Complex C
Other components
Complex C specific factors
7494553
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Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
7494553
NCBI-ProteinID:
XP_024454665
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Position
4:complement(9161370..9168076)
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AA seq
649 aa
AA seq
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MGTGNDELLKSDLGLSDSHSQLGSNETKESKDDEESVELNEGAVGNDERMKNGESVELNE
GAVGNDERMKNGESVELNEGAVGNNEGTKNGEGFELNVGVIGNDEVTVDPGYSALKVGNT
GTEEAATDQSNLVLEERGIGSEEVHFAVETEVDMDLVDSPVRQVNIEVVDAVIVSKKPNI
SSITGNVEDCFLDTQNKSLIQQEKVDGSHVSGVKRKRITYNEEQPSVHVMYNSLTRASKK
KLEELLQQWSEWHAQQNSSSHDSDEMLQSGEDTYFPALRIGMVKSSAVTFWIENQTRKQQ
DNAIIPLQSNYVPLYDRGYALGLTSADGPINIERGLEIVGDAARCYNCASYNHSLKECPK
PRDNAAVNNARKQHKFKRNQNSSSRNPTRYYQSSSGGKYDGLKPGSLDTETQKLLGLGEL
DPPPWLNRMQELGYPPGYLDPDDEDQPSGITIFADGDVNEEQEDGEITETDPPPEPQRKM
SVEFPGINAAIPENADQRLWEVGPTSSDPWRHRSQHRLKYSSEATGRWHHHEQRQYRDDG
PPGVDSVFSPSMSSYPPRYGHYDSSYSSDSPRDLTPAFGRSNSDRGRSSLVHEDFVSHGS
TSNSSLRKRSSPQDIGSARYRTDNSPDDYDTDYSYRDYSFDRHRHRSRR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggggactgggaatgatgagcttttgaaatctgatttagggctaagtgattctcactcc
caactaggtagtaatgagactaaagaaagtaaggatgacgaggagagtgtggagctcaat
gaaggtgctgttggaaatgatgaacgaatgaaaaatggggagagtgtggagctcaatgaa
ggtgctgttggaaatgatgaacgaatgaaaaatggggagagtgtggagctcaatgaaggt
gctgttggaaacaatgaaggtacaaaaaatggggagggttttgagctcaatgtaggtgtt
attggaaatgatgaagttacagtcgatccagggtattctgcgcttaaagtaggtaatact
ggaactgaagaagctgcaacagatcagagtaatttggtgcttgaggaacgtggcattgga
tctgaagaagtccactttgcagtggaaacagaagttgacatggatttggttgattcgcct
gttaggcaagtgaatattgaagtggttgatgctgttatagtttctaagaaaccaaatatt
tcaagcatcacagggaatgttgaggattgtttccttgatacacaaaataaaagtcttatc
cagcaagagaaggttgatggcagtcatgtatcaggtgttaagagaaaaaggataacatat
aatgaagagcaaccttcagtgcatgtcatgtataactccttaacaagagctagcaagaaa
aagcttgaggaactgttacaacagtggtcagagtggcatgctcaacagaactcttcgtct
catgattctgacgagatgctacaatctggtgaagacacttactttcccgctttacgtatt
ggcatggtgaagtcctctgcagtgaccttttggattgaaaaccaaacaaggaaacagcag
gacaatgccataattcctctgcaaagtaattatgtgcctctgtatgatcgtggatatgca
ttgggtttgacttcagcagatggtccaattaacatcgaaagaggcttggagatagtaggt
gatgctgcacgttgttataactgtgcttcgtacaaccactctttgaaggaatgccctaaa
cctcgtgataatgctgctgttaataatgctcgcaaacaacacaagttcaagcgaaatcag
aattctagttcccgcaatccaacacgctattatcagagctcttcaggtggaaagtatgat
ggtttgaagccaggttctcttgacactgaaacacaaaaacttctaggtcttggggaactt
gatcctccaccatggcttaacagaatgcaagagctgggatacccaccaggatatctagat
cccgatgacgaggaccagccatcagggatcacaatatttgccgatggggatgtcaacgag
gaacaggaagatggggagattacggaaacagacccacctcctgaaccacagaggaaaatg
tcagttgaatttcctggaataaatgcggcaatcccagaaaatgcagatcaaagactctgg
gaagttgggcctacaagttctgatccatggaggcaccgatcgcagcatagattgaaatat
tcttcagaagctacaggtagatggcatcatcacgagcaaagacagtatagggatgatggg
cctccaggtgttgattcggtgtttagcccatccatgtctagttaccctccaaggtatggt
cattatgattctagttacagttctgacagcccaagagatctgactcctgcctttgggagg
tccaattctgatagaggaaggagctctttggtacatgaagattttgtaagccatggttcc
acgtcaaactcatccttaagaaaacgttcttcgccacaggatatcggctcagcgaggtac
aggactgataacagcccggatgactatgacacggattattcatatcgggattattcattc
gatcgccatcgccatcgtagcaggcggtaa
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