Populus trichocarpa (black cottonwood): 7494676
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Entry
7494676 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00592
alpha-Linolenic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
7494676
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7494676
NCBI-ProteinID:
XP_002307770
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Position
5:complement(24250298..24255999)
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AA seq
554 aa
AA seq
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MADNNNLTIDPRSGFCKSNSVFYSKRKPIPLPLTDFLDVTTFISSRPHHGKTAFIDAATG
RHLSFKDLWKAVDSVSTCLYDMGIRKGHVILLLSPNSIFFPIVCLSVMSLGAVITTTNPL
NTPREIAKQIANSKPSLAFTTPELLAKLTESNSNLTIILIDDGITDASTKTNAKIVTTLS
EMVKKEPSGIRVREQVNQDDTATLLYSSGTTGESKGVVSSHKNLIAMVQTIVERFRLNEG
DHKFICTVPMFHIYGLAAFATGILAAGSTVIVLSKFEMGEMLSTIVKYRATYLPLVPPIL
VALINGADQLRERYDLSSLNFVLSGGAPLSKEMVEGFSEKYPGVTILQGYGLTESAGIGA
STDTLEESRRYGTAGLLSPNTEAKIVDPESGNALLVNQTGELWLRAPSVMKGYFSNAEAT
SSTIDSEGWLRTGDLCYIDDDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPEISDAA
VIPFPDEQVGQFPMAYVVRKAGSKLSEKAVMDFIAGQVAPYKRIRRVAYVAAIPKNPSGK
ILRKDLIKLATSKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacaacaacctcacaatcgacccaagaagcgggttttgcaaatcaaactct
gttttctacagcaaacgcaagccaatcccactcccactaactgacttcctagacgtcacc
accttcatatcctcccgtcctcaccacggcaaaacagccttcatcgacgcagctaccggc
cgccacctctccttcaaagacctatggaaagcagtagattccgtttccacttgtctctac
gacatgggaatccgcaaaggccacgtcatcctcttactttctccgaactccatcttcttc
cccatcgtttgcctctccgtcatgtctttaggcgctgtaattaccaccactaatcctctc
aacactcctcgtgaaatcgctaaacaaattgccaactcgaaaccttcactcgctttcact
actcctgaactccttgccaaactcaccgagtcaaactcaaacctcaccatcatcctcata
gacgatgggatcactgatgcctccactaaaacaaacgccaaaattgtgacaacattaagt
gaaatggtaaaaaaagaaccaagtgggatccgagttagagagcaagtcaaccaggatgac
acagcgacgctactctactcttcaggcacaacaggagaaagcaaaggtgtggtgtcctca
cacaagaacttaatcgctatggtacaaacgattgttgaacggttcagattaaacgaagga
gatcacaaatttatctgtacggtcccgatgtttcacatctacggtttagcagcgtttgcc
acaggaattctggcagcagggtcaacggtcatcgttctctcaaaattcgaaatgggggag
atgttatcgacgattgtgaaataccgggccacttatttaccactcgtgccgccgatacta
gtagcgctgatcaacggggctgatcagttacgggagaggtatgatttgagttcgttgaat
tttgttttatcaggcggagctccattgagtaaggaaatggttgaagggttttcggagaag
tatccaggggttacgattttacaaggttatgggctcactgaatcggcggggattggtgct
tcgacggatacgttggaggagagtaggaggtatggcacggcagggctattgtcgccaaac
acggaggccaagattgtggacccggagagtggtaacgctttgctggtgaaccagaccggt
gagctttggcttcgagctccttctgtcatgaaaggttactttagtaacgctgaagctact
tcatcaactatcgattcagagggatggttaagaacaggagatctctgctacattgatgat
gatggcttcattttcgtggttgatcggttaaaggagctgattaaatacaagggttatcag
gtccctccggcagaactagaggcattgctactaactcacccagagatttctgatgctgct
gtaataccgtttcctgacgagcaggtcgggcagttccccatggcttacgtggtaagaaaa
gctggaagtaaattatccgagaaagctgtcatggatttcatagcaggacaggtggcgcca
tacaaaagaattcggagagtcgcatacgttgctgccatacctaagaatccgtctggcaag
attctccgaaaggatcttatcaagctcgcaacctccaagctctga
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