KEGG   Populus trichocarpa (black cottonwood): 7494732
Entry
7494732           CDS       T01077                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7494732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7494732
Spliceosome [BR:pop03041]
 Complex A
  U2 snRNP components
   U2 related factors
    7494732
 Complex B
    7494732
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 7494732
NCBI-ProteinID: XP_002307825
UniProt: B9H5X4
LinkDB
Position
5:complement(24827908..24831400)
AA seq 272 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP
GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED
QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL
RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRRNDRDGGRKRH
GSPRRSRSPVREGSEERRARIEQWNREREEKQ
NT seq 819 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcttcaatcttcggtaccgagaaagaccgagttaattgccctttc
tacttcaagattggcgcatgccgtcacggcgatcgctgctctcgcctccacaatcgcccc
accatctctcccactctcttattatccaacacgtaccaccgccctgacatgattactccc
ggtgtcgatgctcaaggccagccactcgacccacacaagatccaggagcatttcgaagat
ttttatgaggatatttttgaagaactaagcaaatttggtgagatcgagaaccttaatgtt
tgtgataacctcgccgatcacatgatcggtaacgtttatgttcagttcaaggaggaggac
caagctgctgccgctttgcaatctcttcagggacgattttactctggtcgtcctattatc
gccgatttctctccagtcactgattttcgtgaagctacctgcagacagtacgaggagaat
aactgcaatcgtggtggttattgtaattttatgcatgtgaagctgattgggaaggatttg
cggagaaagttgtttggaagatatcggggatacagggttagtaggagtcggagtaggagt
gtgagtccgaggaggagggatagagattatgataggcgtgagagggattacagagacaga
gaccgtgattatcgtggaaatgggaggaggaatgacagagacggagggaggaaaagacac
gggagtccgaggaggagcaggagcccggtcagggaaggcagcgaggaaagaagggccagg
attgagcagtggaatagagagagggaggagaagcagtga

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