Populus trichocarpa (black cottonwood): 7494932
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Entry
7494932 CDS
T01077
Name
(RefSeq) vacuolar protein sorting-associated protein 24 homolog 1 isoform X1
KO
K12193
charged multivesicular body protein 3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7494932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7494932
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7494932
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
7494932
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7494932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
PSD4
NAD_binding_11
DIP2116-like_N
YdaS_toxin
HTH_26
DUF5685
SapB_1
Motif
Other DBs
NCBI-GeneID:
7494932
NCBI-ProteinID:
XP_002311070
UniProt:
A0A3N7FF90
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Position
8:1884579..1887796
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AA seq
229 aa
AA seq
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MDKFKSMLKPKPNPQQQLRDWQRKLRQECRNIERQIRDVQREEKSVHKAIKEAAKRNDMG
SAKALAKEIVMSRKAVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
KAPEMAATMQEFSREMTKAGVIEEMVTDAVDSALDSEDIEEEIEEEVDKVLTEIAGETAA
QLPEAVRKERVRVPAQEASTSHEEEAIAEGVDDEEELEELRARLAKVRS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggataaattcaagagcatgttaaaaccgaaaccaaacccacaacagcaattgagggat
tggcagagaaaactacgtcaagagtgccgtaacattgagcggcaaatcagagatgtgcag
agagaggagaaaagtgtacataaggcaattaaggaggctgccaagagaaatgacatgggc
tcagctaaggcacttgcaaaggagattgtgatgtcgagaaaagctgtgaaccgtctttat
gaaaataaggcccaactgaattcaatatcaatgcacctcggagaaagtgttgcaattgcc
cgtactgtgggtcatttatctaaaagtgctgaagtcatgaaacttgtcaataaccttatg
aaagctccagaaatggctgccacaatgcaagaattcagcagggaaatgacaaaggctggc
gttattgaagaaatggtaactgacgctgttgattcagcactggattctgaagacatcgaa
gaggaaattgaagaagaagttgataaggtcctaacagaaatagctggtgagacagctgct
cagcttcctgaagctgtcagaaaggaaagagtaagggtacctgcccaagaagcaagcacc
tcacatgaagaagaagctattgcagagggtgtagatgacgaggaagaactagaagagcta
agggctcggctagccaaagtcagatcttag
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