Populus trichocarpa (black cottonwood): 7494941
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Entry
7494941 CDS
T01077
Name
(RefSeq) pumilio homolog 4 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
COG5_C
DUF445
Motif
Other DBs
NCBI-GeneID:
7494941
NCBI-ProteinID:
XP_006379542
UniProt:
A0A2K1ZB68
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All DBs
Position
8:2013130..2021458
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AA seq
1031 aa
AA seq
DB search
MFTGSSNIEMLPTVDDYLQGGFGGNLEDNLQSELELILQARRRNQRIERDLDRYRSGSAP
PTVEGSLSAVGSLFRNNNLSDINSVTSSNGNCNNVVLTEEEIRSHPSYLSYYYSHDSINP
RLPPPLLSKEDWRVAQRFQSSGSMFGGIGNLRKNKVVEDSDSSSLFSIQPGLSVHKVDID
LIESSNSSRNNVIRNASSKWLDRGSSDPGLQRSRLGARRKSFADILQEGLDQPTSIPGHL
SSPASHTTFSDLLDTTGECDPHQVGLHDGMESLEGLYSGAATTAFTGTQSHSNTFSHSFA
SAVGSSLSRSTTPEQQLLGRPAISSLHPVGSRVGPIEKKNAVGMIVQNNHSSGITELGEI
ANTLSGLNLLNTRLTDQESHTRGQLQMDLDSEPHFPFNMSNGAEQALHQQLIETSKVENL
SFSTNHTDMPRNNRIIPNNNASKISYNGEVSIPRRTSSSTNLHSQMNSLGLGSLERSNVY
HQNANIPIMDFTGHVPDDYSTLKLNSMIKNHFDTGGVGIENGFNRLGNQVGSDLRSPFLD
PRYTQSLQRMLDYATHAVASSSEPPVRDYFGTSEGDLDRIQKAYLETLLVQQKQQYELPI
LTKSGGLNQGYHRNSSYNLSMPYPENSAVKSMLPSVGSGGFQSGRASHLASVMRSSTGGS
TGSRQSDIGCNAERKQSSSFIDEFKNNKTGSFELSDIVGHVVEFSTDQYGSRFIQQKLET
ASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTESQRIELASQLTGHVLPLSLQM
YGCRVIQKALEVIDVDRQTQMVAELDGSVMKCIRDQNGNHVIQKCIECVPGDRIQFITSA
FYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIMDEIMQSVCALAQDQYGNYVIQHVLE
HGKPQQRSVIIRKLAGQIVLMSQQKFASNVVEKCLTFGGPDERQLLVNEMLGSTDENEPL
QAMMKDPFGNYVVQKVLETCDDRSLELILSRIRIHLSALKRYTYGKHIVSRVEKLITTGE
RRIRLSFAVSS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgggagcagtaacatagagatgctaccgactgtggatgattatctacaaggg
gggttcggtggtaatttagaggataatttgcagagcgaactggaactgattctacaagca
cggcgtcgtaatcaacgcatagaaagagatcttgatagatataggagtggcagtgctccg
cctactgttgagggatcattaagtgctgtgggaagcctttttaggaacaataatttgagt
gacatcaatagtgtcactagtagtaatggtaactgtaacaatgtggttttgaccgaagag
gagattcgctcgcacccatcttacctttcgtattactattctcatgacagcattaaccca
agattgcccccacctttgttgtcaaaggaggattggcgtgttgcacaaaggtttcagtct
tcaggatctatgtttggtggtattggcaacttgaggaagaataaggtggtagaagatagc
gatagttcatcactgttttcaatacagccaggactttcagtgcataaggttgacattgat
ttgatagaatcgagtaattcaagtagaaataatgtcatcaggaatgcttcatccaagtgg
cttgatagaggttccagtgatcctggattgcagcgctccaggcttggtgcaaggaggaaa
agttttgctgacattctacaggaaggacttgatcagcccacttccataccaggtcaccta
tcttccccagcaagtcatactactttttctgatcttctggatacaactggtgaatgtgat
cctcatcaagttgggttacatgatggaatggaatccctggaaggcttgtattctggagca
gctaccactgccttcacaggaactcaaagccacagcaataccttttctcactcctttgca
tctgctgtgggctcatcattgtctaggagtacaacacctgaacagcagctgcttgggagg
cctgctatttctagtctacatcctgttggcagcagagttggtcctattgagaagaagaat
gctgttggcatgattgtccaaaataatcattcttctgggattaccgagcttggggaaatt
gccaatacgttgtctggattaaaccttttgaacactagactcacagatcaagagagtcat
acacgaggccaactgcaaatggatctggacagtgagccacattttccttttaacatgtcg
aatggtgctgagcaggctctgcatcagcaactcatagaaacatccaaggtagaaaatctc
tcattttctaccaaccatactgatatgccgagaaacaacaggatcataccaaacaataat
gcttctaagataagttataatggggaagttagtattcccagaagaacttcttcttctacc
aatcttcactcacaaatgaattccttgggccttggaagtttggaaagatcaaatgtttat
catcaaaatgcaaatattccaattatggatttcactggccatgtacctgatgattattcg
acactgaaactgaattcaatgatcaagaatcattttgacacaggtggtgttggaattgag
aatggtttcaatagactgggaaatcaagtagggtctgatcttcgttctccatttctggac
ccacgctatactcagtccttgcaaagaatgttggattatgcaacacatgctgtagctagt
tcaagtgagcctccagttagagattattttggcacttcggagggagacttggacaggatt
caaaaagcttatcttgagacattgcttgttcagcagaagcaacaatatgaattgccaatt
ctaaccaaatctggtgggttgaatcagggataccataggaattcatcatataatcttagc
atgccatatccagagaactcagcagtgaaatctatgcttccttctgttggatctgggggt
tttcagagtgggcgagcttcacacttagcttctgtgatgaggagttcgacgggaggatcc
actgggtcacggcagtctgatattggctgcaatgctgaaagaaaacagtcttcatccttt
atagatgaatttaagaacaacaagactggttcttttgaactttcagacattgttggtcat
gttgttgaattcagcacagatcagtatggaagtcggtttatccagcagaaactagaaact
gcttcagttgaagagacgaacaagatattccctgagattattcctcatgctcttaccttg
atgactgatgtttttggaaattatgttatacaaaagtttcttgatcaaggtacagaaagt
caaagaatagagttagccagtcagcttactggtcatgttttacctctcagtcttcaaatg
tatgggtgcagagtaatccagaaggctttggaggtgattgacgtggatcgacagactcaa
atggtggcagagctagatggctctgtcatgaaatgtattcgtgatcagaatggtaatcat
gttattcagaagtgtatagagtgtgttccaggagatcgaatacagttcatcacctcagct
ttctatgggcaagttgtggccctttccacccacccttatggttgccgtgttatccagagg
gtcttggagcattgtaaggacatgaatacacagcaagttattatggatgaaattatgcag
tctgtatgcgctttggcacaagatcaatatggaaattatgtcattcagcatgtcctggag
catggtaagccacaacaacgatctgttattattagaaagcttgcgggacagattgttttg
atgagtcagcagaaatttgcttctaatgttgtggagaagtgcttgacatttggtggccct
gatgagcgccagcttttggtgaatgagatgcttggttccactgatgaaaatgagcccttg
caggctatgatgaaagatccgtttggaaattatgttgtacaaaaggttcttgagacctgc
gatgatcgaagtctagagttaattctttctcgcattaggattcatttgagtgccctgaag
agatacacttatggtaaacatattgtttcgcgtgttgagaagctcatcacaactggagaa
aggcgcatacggttgtcattcgcagtctcctcctaa
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integrated database retrieval system