KEGG   Populus trichocarpa (black cottonwood): 7494941
Entry
7494941           CDS       T01077                                 
Name
(RefSeq) pumilio homolog 4 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
pop  Populus trichocarpa (black cottonwood)
SSDB
Motif
Pfam: NABP PUF PUF_NOP9 COG5_C DUF445
Other DBs
NCBI-GeneID: 7494941
NCBI-ProteinID: XP_006379542
UniProt: A0A2K1ZB68
LinkDB
Position
8:2013130..2021458
AA seq 1031 aa
MFTGSSNIEMLPTVDDYLQGGFGGNLEDNLQSELELILQARRRNQRIERDLDRYRSGSAP
PTVEGSLSAVGSLFRNNNLSDINSVTSSNGNCNNVVLTEEEIRSHPSYLSYYYSHDSINP
RLPPPLLSKEDWRVAQRFQSSGSMFGGIGNLRKNKVVEDSDSSSLFSIQPGLSVHKVDID
LIESSNSSRNNVIRNASSKWLDRGSSDPGLQRSRLGARRKSFADILQEGLDQPTSIPGHL
SSPASHTTFSDLLDTTGECDPHQVGLHDGMESLEGLYSGAATTAFTGTQSHSNTFSHSFA
SAVGSSLSRSTTPEQQLLGRPAISSLHPVGSRVGPIEKKNAVGMIVQNNHSSGITELGEI
ANTLSGLNLLNTRLTDQESHTRGQLQMDLDSEPHFPFNMSNGAEQALHQQLIETSKVENL
SFSTNHTDMPRNNRIIPNNNASKISYNGEVSIPRRTSSSTNLHSQMNSLGLGSLERSNVY
HQNANIPIMDFTGHVPDDYSTLKLNSMIKNHFDTGGVGIENGFNRLGNQVGSDLRSPFLD
PRYTQSLQRMLDYATHAVASSSEPPVRDYFGTSEGDLDRIQKAYLETLLVQQKQQYELPI
LTKSGGLNQGYHRNSSYNLSMPYPENSAVKSMLPSVGSGGFQSGRASHLASVMRSSTGGS
TGSRQSDIGCNAERKQSSSFIDEFKNNKTGSFELSDIVGHVVEFSTDQYGSRFIQQKLET
ASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTESQRIELASQLTGHVLPLSLQM
YGCRVIQKALEVIDVDRQTQMVAELDGSVMKCIRDQNGNHVIQKCIECVPGDRIQFITSA
FYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIMDEIMQSVCALAQDQYGNYVIQHVLE
HGKPQQRSVIIRKLAGQIVLMSQQKFASNVVEKCLTFGGPDERQLLVNEMLGSTDENEPL
QAMMKDPFGNYVVQKVLETCDDRSLELILSRIRIHLSALKRYTYGKHIVSRVEKLITTGE
RRIRLSFAVSS
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgttcactgggagcagtaacatagagatgctaccgactgtggatgattatctacaaggg
gggttcggtggtaatttagaggataatttgcagagcgaactggaactgattctacaagca
cggcgtcgtaatcaacgcatagaaagagatcttgatagatataggagtggcagtgctccg
cctactgttgagggatcattaagtgctgtgggaagcctttttaggaacaataatttgagt
gacatcaatagtgtcactagtagtaatggtaactgtaacaatgtggttttgaccgaagag
gagattcgctcgcacccatcttacctttcgtattactattctcatgacagcattaaccca
agattgcccccacctttgttgtcaaaggaggattggcgtgttgcacaaaggtttcagtct
tcaggatctatgtttggtggtattggcaacttgaggaagaataaggtggtagaagatagc
gatagttcatcactgttttcaatacagccaggactttcagtgcataaggttgacattgat
ttgatagaatcgagtaattcaagtagaaataatgtcatcaggaatgcttcatccaagtgg
cttgatagaggttccagtgatcctggattgcagcgctccaggcttggtgcaaggaggaaa
agttttgctgacattctacaggaaggacttgatcagcccacttccataccaggtcaccta
tcttccccagcaagtcatactactttttctgatcttctggatacaactggtgaatgtgat
cctcatcaagttgggttacatgatggaatggaatccctggaaggcttgtattctggagca
gctaccactgccttcacaggaactcaaagccacagcaataccttttctcactcctttgca
tctgctgtgggctcatcattgtctaggagtacaacacctgaacagcagctgcttgggagg
cctgctatttctagtctacatcctgttggcagcagagttggtcctattgagaagaagaat
gctgttggcatgattgtccaaaataatcattcttctgggattaccgagcttggggaaatt
gccaatacgttgtctggattaaaccttttgaacactagactcacagatcaagagagtcat
acacgaggccaactgcaaatggatctggacagtgagccacattttccttttaacatgtcg
aatggtgctgagcaggctctgcatcagcaactcatagaaacatccaaggtagaaaatctc
tcattttctaccaaccatactgatatgccgagaaacaacaggatcataccaaacaataat
gcttctaagataagttataatggggaagttagtattcccagaagaacttcttcttctacc
aatcttcactcacaaatgaattccttgggccttggaagtttggaaagatcaaatgtttat
catcaaaatgcaaatattccaattatggatttcactggccatgtacctgatgattattcg
acactgaaactgaattcaatgatcaagaatcattttgacacaggtggtgttggaattgag
aatggtttcaatagactgggaaatcaagtagggtctgatcttcgttctccatttctggac
ccacgctatactcagtccttgcaaagaatgttggattatgcaacacatgctgtagctagt
tcaagtgagcctccagttagagattattttggcacttcggagggagacttggacaggatt
caaaaagcttatcttgagacattgcttgttcagcagaagcaacaatatgaattgccaatt
ctaaccaaatctggtgggttgaatcagggataccataggaattcatcatataatcttagc
atgccatatccagagaactcagcagtgaaatctatgcttccttctgttggatctgggggt
tttcagagtgggcgagcttcacacttagcttctgtgatgaggagttcgacgggaggatcc
actgggtcacggcagtctgatattggctgcaatgctgaaagaaaacagtcttcatccttt
atagatgaatttaagaacaacaagactggttcttttgaactttcagacattgttggtcat
gttgttgaattcagcacagatcagtatggaagtcggtttatccagcagaaactagaaact
gcttcagttgaagagacgaacaagatattccctgagattattcctcatgctcttaccttg
atgactgatgtttttggaaattatgttatacaaaagtttcttgatcaaggtacagaaagt
caaagaatagagttagccagtcagcttactggtcatgttttacctctcagtcttcaaatg
tatgggtgcagagtaatccagaaggctttggaggtgattgacgtggatcgacagactcaa
atggtggcagagctagatggctctgtcatgaaatgtattcgtgatcagaatggtaatcat
gttattcagaagtgtatagagtgtgttccaggagatcgaatacagttcatcacctcagct
ttctatgggcaagttgtggccctttccacccacccttatggttgccgtgttatccagagg
gtcttggagcattgtaaggacatgaatacacagcaagttattatggatgaaattatgcag
tctgtatgcgctttggcacaagatcaatatggaaattatgtcattcagcatgtcctggag
catggtaagccacaacaacgatctgttattattagaaagcttgcgggacagattgttttg
atgagtcagcagaaatttgcttctaatgttgtggagaagtgcttgacatttggtggccct
gatgagcgccagcttttggtgaatgagatgcttggttccactgatgaaaatgagcccttg
caggctatgatgaaagatccgtttggaaattatgttgtacaaaaggttcttgagacctgc
gatgatcgaagtctagagttaattctttctcgcattaggattcatttgagtgccctgaag
agatacacttatggtaaacatattgtttcgcgtgttgagaagctcatcacaactggagaa
aggcgcatacggttgtcattcgcagtctcctcctaa

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