Populus trichocarpa (black cottonwood): 7495129
Help
Entry
7495129 CDS
T01077
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7495129
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
7495129
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
7495129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
MetW
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
7495129
NCBI-ProteinID:
XP_006386391
UniProt:
B9GUI4
LinkDB
All DBs
Position
2:complement(6605592..6608265)
Genome browser
AA seq
443 aa
AA seq
DB search
MVFCFLRSYRFTEATWEAFSLPNFVFRGVCHPGIFKPMRGIKVKGLSCLRTLVSDGESHV
QPMPLVEEETGSSSSVQSTPEIEKNYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGS
LVLDAGCGNGKYLGFNPDCTFVGCDISGPLIKICADRGHEVLVADAVNLPYRTGFGDAAI
SIAVLHHLSTENRRKRAIDELVRAVKKGGLILITVWAVEQEDRSLVTKWTPLNQKYVDEW
IGPGSPRIRSPSSITLESIPETENNSKEHEKDTESLNHKFKGTVPSTSKDVRSVQNQQEY
VDEWIGPGSPRIRSPSPITLESIPETENNSKEHEKDTESLNHEFKGTMPSTSKDDSSVPN
QQEYFVPWHLPYHRAEVSGASACALENGLAKKDDKKGAVVYNRYYHVFSEGELERLVSGM
NNAVVVDRFFDKSNWCIILQKTL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtcttttgctttctgagatcatatagattcactgaagcgacctgggaggccttcagt
ctacccaattttgtatttcgtggggtctgccatcctggaatttttaaacccatgagagga
atcaaagtaaagggcttgtcttgtttgcgtactcttgtatctgatggagaatctcatgtt
caacccatgccattagttgaagaagagacaggttcatcgtcaagtgtacagtccacccct
gaaatagaaaagaattatgtgcatcgtgtttatgatgccattgcacctcattttagttcc
accaggtttgccaagtggccaaaagttgcaacctttttgaactccttgccctcaggatct
cttgtattggatgcaggatgtggaaatgggaagtacttggggtttaatccggattgcact
tttgtaggatgtgatataagtggaccacttatcaaaatttgtgcagacagaggtcatgaa
gttcttgttgcagatgcagtaaatcttccttaccgaactggttttggtgacgcggcaata
tctatagcagtgttacatcacctgagtacagagaacaggaggaagagggcaatagatgaa
ttagtccgagctgtcaaaaagggtggtctgattctaataactgtgtgggctgtagaacag
gaggatcgatcattggttacaaaatggactccccttaaccaaaagtatgttgatgagtgg
ataggaccaggcagtcctcgtattcgaagcccttcatccatcacactagaaagcatccct
gaaaccgagaataattcaaaggagcatgaaaaagataccgagagtctaaaccacaagttc
aagggaactgtgccttcgacatctaaagatgttagaagtgtacaaaatcaacaggagtat
gttgatgagtggataggaccaggtagtcctcgtattcgaagcccttcacccatcacacta
gaaagcatccctgaaaccgagaataattcgaaggagcatgaaaaagataccgagagtcta
aaccacgagttcaagggaactatgccttcaacgtctaaagatgatagcagtgtaccaaat
caacaggagtattttgtgccttggcacttaccttaccaccgtgctgaagtcagtggtgca
tctgcatgtgctcttgaaaatggcctggcaaagaaggatgataaaaaaggtgctgtggta
tataacaggtactaccatgtcttcagtgaaggtgaacttgaaaggttggtttctggaatg
aacaatgcagtagtagttgatcgattttttgacaagtcaaactggtgtatcattcttcag
aaaactttatga
DBGET
integrated database retrieval system
