Populus trichocarpa (black cottonwood): 7495201
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Entry
7495201 CDS
T01077
Name
(RefSeq) SWR1-complex protein 4
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7495201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7495201
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
7495201
NuA4 complex
7495201
Chromatin remodeling factors
SRCAP complex
7495201
SWR1 complex
7495201
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Laminin_I
Motif
Other DBs
NCBI-GeneID:
7495201
NCBI-ProteinID:
XP_024441330
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All DBs
Position
14:7911246..7916855
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AA seq
449 aa
AA seq
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MDAKDILGLPKTPLPLTQEKKSQPKKDSQRKPDGISREVYALTGGLAPLMPSIDVSQLKR
RPPSDEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTEEE
YEKYLTDPMWTKEETDQLFDLCERFDLRFVVIADRFTSSRSVEELKDRYYNVSRAMLIAR
APSPGDVSGHPLVKEPYNSSQETERKRALSMVLSQTKHQERKDTQVLAEAKKIVESRITA
LGTEESALPVASNVDPDIAEIAVNLDDSASPSSNAQLASASVAPSTSAMADNASTLASLR
MLRVYLRTYGLEQMVQAASSSAGLRTIKRVEQTLQDLGVSLKPKVPTKAVCSEHLELRKE
ILTLLNLQKQLQYKEAEGSSFRDGSYTDIPGSPKRSQRDQDRTFIPDSMSFGGDRVGRRD
QKRKGPGRVSENPSSPAHKRPRKLKASDL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaaggacatcttgggactgccaaaaactccattgccactaacacaagagaag
aaatcccaacctaaaaaagactcgcagagaaaacctgatggcatttcgcgtgaggtttat
gcacttacaggtggattggctcctcttatgccatcgattgacgtgtcgcaactgaaacga
cgccctccatcggacgagaagatcacctggcagtggcttccttttacaagttctgctcgg
aaggataatctacagctttaccattgggttagagttgtgaatggtgttccacccacaggt
gattattcctttgccaagtacaacaagtctgttgatgttgtgaaatatacagaggaggaa
tatgaaaagtatttgactgatcctatgtggaccaaagaagagacagatcaattgtttgac
ttgtgtgaacgatttgatctccgctttgtagtgatagcagaccgattcacgtcatctcgt
agtgttgaggaattgaaagatcgttattacaatgtttctcgagctatgttgattgccaga
gctccatcacctggggatgtttcagggcaccctctggttaaggaaccttacaacagttca
caagagacagaacgcaagcgagcattgtctatggtcctctcgcaaacaaagcatcaagag
cgaaaagacactcaggttttggctgaagcgaagaaaatagttgagtcacgcataactgca
ctgggtactgaagaatctgcattgcctgttgcgtcaaatgttgaccctgatattgctgag
atagcagttaatcttgatgattctgcatcaccttcatctaatgctcagcttgcctctgca
tcagttgcaccttcaacttcagcaatggcagataatgcttctactctagcttccctgcgt
atgcttcgtgtttacctgagaacatatgggctcgagcaaatggtgcaagctgcaagttca
tctgcaggacttaggacaatcaagagggttgaacaaacattgcaagatcttggggttagt
ttaaaaccaaaggtgccaaccaaagctgtttgttctgagcaccttgaattaagaaaggaa
atattgacattgctgaatcttcaaaaacagttacaatacaaggaggcagaaggttcatct
tttcgcgatggttcatacactgatataccaggctcacctaagcggtcacagcgtgatcag
gatcgaacatttattccggactcaatgagttttggaggagacagagttggcagaagggac
cagaaacgcaagggacctggaagggtatctgagaatccatcttcacccgctcataaaagg
cccagaaaattgaaggcttctgatctatga
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