Populus trichocarpa (black cottonwood): 7495201
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Entry
7495201 CDS
T01077
Name
(RefSeq) SWR1-complex protein 4
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7495201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7495201
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
7495201
NuA4 complex
7495201
Chromatin remodeling factors
SRCAP complex
7495201
SWR1 complex
7495201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Laminin_I
Motif
Other DBs
NCBI-GeneID:
7495201
NCBI-ProteinID:
XP_024441330
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All DBs
Position
14:7911246..7916855
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AA seq
449 aa
AA seq
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MDAKDILGLPKTPLPLTQEKKSQPKKDSQRKPDGISREVYALTGGLAPLMPSIDVSQLKR
RPPSDEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTEEE
YEKYLTDPMWTKEETDQLFDLCERFDLRFVVIADRFTSSRSVEELKDRYYNVSRAMLIAR
APSPGDVSGHPLVKEPYNSSQETERKRALSMVLSQTKHQERKDTQVLAEAKKIVESRITA
LGTEESALPVASNVDPDIAEIAVNLDDSASPSSNAQLASASVAPSTSAMADNASTLASLR
MLRVYLRTYGLEQMVQAASSSAGLRTIKRVEQTLQDLGVSLKPKVPTKAVCSEHLELRKE
ILTLLNLQKQLQYKEAEGSSFRDGSYTDIPGSPKRSQRDQDRTFIPDSMSFGGDRVGRRD
QKRKGPGRVSENPSSPAHKRPRKLKASDL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaaggacatcttgggactgccaaaaactccattgccactaacacaagagaag
aaatcccaacctaaaaaagactcgcagagaaaacctgatggcatttcgcgtgaggtttat
gcacttacaggtggattggctcctcttatgccatcgattgacgtgtcgcaactgaaacga
cgccctccatcggacgagaagatcacctggcagtggcttccttttacaagttctgctcgg
aaggataatctacagctttaccattgggttagagttgtgaatggtgttccacccacaggt
gattattcctttgccaagtacaacaagtctgttgatgttgtgaaatatacagaggaggaa
tatgaaaagtatttgactgatcctatgtggaccaaagaagagacagatcaattgtttgac
ttgtgtgaacgatttgatctccgctttgtagtgatagcagaccgattcacgtcatctcgt
agtgttgaggaattgaaagatcgttattacaatgtttctcgagctatgttgattgccaga
gctccatcacctggggatgtttcagggcaccctctggttaaggaaccttacaacagttca
caagagacagaacgcaagcgagcattgtctatggtcctctcgcaaacaaagcatcaagag
cgaaaagacactcaggttttggctgaagcgaagaaaatagttgagtcacgcataactgca
ctgggtactgaagaatctgcattgcctgttgcgtcaaatgttgaccctgatattgctgag
atagcagttaatcttgatgattctgcatcaccttcatctaatgctcagcttgcctctgca
tcagttgcaccttcaacttcagcaatggcagataatgcttctactctagcttccctgcgt
atgcttcgtgtttacctgagaacatatgggctcgagcaaatggtgcaagctgcaagttca
tctgcaggacttaggacaatcaagagggttgaacaaacattgcaagatcttggggttagt
ttaaaaccaaaggtgccaaccaaagctgtttgttctgagcaccttgaattaagaaaggaa
atattgacattgctgaatcttcaaaaacagttacaatacaaggaggcagaaggttcatct
tttcgcgatggttcatacactgatataccaggctcacctaagcggtcacagcgtgatcag
gatcgaacatttattccggactcaatgagttttggaggagacagagttggcagaagggac
cagaaacgcaagggacctggaagggtatctgagaatccatcttcacccgctcataaaagg
cccagaaaattgaaggcttctgatctatga
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