Populus trichocarpa (black cottonwood): 7495314
Help
Entry
7495314 CDS
T01077
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7495314
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
7495314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
7495314
NCBI-ProteinID:
XP_002317286
LinkDB
All DBs
Position
11:8979601..9002240
Genome browser
AA seq
624 aa
AA seq
DB search
MVESGKRSRPQRDYDGDTNNQKRHKDDKGTNNDGLIVYRILCPDGVIGSVIGKSGKVINS
IRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVHAA
ISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKDST
DPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSIIIPS
DVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLPVVPSFGN
VSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATE
SPDDLKSMAVEAILLLQGKINDEDDDTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNAD
VRISKGAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLVGTDSV
YPVGAGLSIPSILPSVPPVAPMGYDQRAESGSGLGLLSSSSLYGYGSLPMVENSYGSLAS
YSSSKLYAGFPPPSTLEMLVPANAVGKVMGKGGANIANIRKISGAMIEISDANSARGDRI
ARISGTLEQKRAAENLIQAFIMAT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtggagagtggaaagcggtcgcgtccccaaagagattatgacggggatactaataat
cagaagaggcacaaagatgataaaggtactaataatgatggactgattgtttatagaata
ttatgccctgacggggtaattggaagtgtcattggtaagagtggtaaagtcataaactcc
ataaggcatgagtcaagggcaagagttaaggtggtggacccgtttccaggtgccaaggat
aggatcataacgatttattgccatatcaaggagaaggaagatgttgatgttgatgatgat
ttcaatcacaccaaccctttgtgtgctgcacaggatgctcttcttaaagttcatgctgcg
atttctaatgctgttgcatctcttggggattctgacaagagactgagagataaggaggaa
tgccagattcttgtcccagctagccagtctgcaaatattattggcaaggctggggcaact
ataaagagactgagaagcaagaccaggaccagcattaaaatcattgccaaagattccact
gacccaactcactcatgtgctatggactttgacaactttcttctgataaccggcgaatca
gaagctgtgaagaaagctttgtttgcagtttctgcaatcatgtataagttcaatccaaaa
gaagaaattccccttgaggcaactgtaccagaacctcctccaagcatcattataccatca
gatgtccctatttatcaaccgggtggattttatccaaatgcagaaccaattgtttcttct
agatctgttccaccaatcttaggtgctacacatataccagagcttcagggttatggggat
atggggagttcttggcccgtttatacatctacactccctgtagttcctagttttggcaat
gtctctcgatatgaggagttaattatacgagtattatgcccgtttgacaagattgggcgt
gtcattggcaagggtgggagtaccattaaaagcataagacaggcaagtggtgctcgtatt
gaggttgatgatactaaggctgatcgggatgagtgtatcattacagttactgcaactgag
tctcccgatgatttgaaatccatggcagttgaagccattttattgcttcaaggaaagatt
aatgatgaagacgatgacactgttggctgtcgactccttgttctgtctaaagttattggg
tgtatcataggaaaaggtggttcaactataaacgaaattcgaaagagaactaatgctgat
gtccgcatctcaaaaggggctaagcctaattgtgctgatagtaatgatgaacttgttgag
gtggttggggaagttagtagcgttagagatgcacttgtccagattgttctaaggctcaga
gatgatgtattgaaagaaaaggatggtggtctgaattctttggttggtactgactctgta
taccctgttggtgctggtctttctataccatctatcctgccttctgttccaccagttgct
ccaatgggttatgatcagagggctgaaagtggaagtggattgggcctgctttcatcaagc
agcctttatggatacggatccttaccgatggtagaaaatagctatggttctctggcctcg
tattcttcatctaagctgtatgcaggttttcccccaccctcaactcttgaaatgttagtg
cctgctaatgcagttggcaaagtgatgggtaaaggaggtgcaaatatagccaacatccga
aagatatcaggagcaatgatagaaatctctgatgccaattctgcaagaggtgatcgtatt
gctcgtatatctggcacgctagagcaaaaacgggccgctgaaaacttgatccaggcattt
attatggccacttaa
DBGET
integrated database retrieval system
