Populus trichocarpa (black cottonwood): 7495478
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Entry
7495478 CDS
T01077
Name
(RefSeq) tubby-like F-box protein 5
KO
K19600
tubby and related proteins
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7495478
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
7495478
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
7495478
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
Tubby family proteins
7495478
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
ARM_7
DUF3527
Cas8b_N
Motif
Other DBs
NCBI-GeneID:
7495478
NCBI-ProteinID:
XP_006380767
UniProt:
A0ACC0SP29
A0ACC0SNY6
A0ACC0SP03
A0ACC0SNW2
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Position
7:1795146..1798158
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AA seq
416 aa
AA seq
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MSIKSIVRELKEMKDGIGNISRRGLEGKHWRGRARSHIAPDETPAETDQIEQGQWANLPP
ELLLDIIRRVEESETSWPARAVVVHCASVCRSWREITKEIVKTPEQCGRLTFPISLKQPG
HRESPIQCFIKRDTATSTFLLYYGLVPSEGENDKLLLAARKIRRATCSDFIVSLVSDDFS
RASNTYVGKLRSNFLGTKFTMYDCEPTFEVPTQTQHANRISRRFHSRQVSPRLPACNYSI
GTITYELNVLRSRGPRRMHCMMHSIPMSSIEEGGTVPTLTSLTETFGGQFPHLSTSKGKE
SVSDISSPSPSQSPVLTQGSEEPLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVA
AVESFHNVSSADQERVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaaaagcatcgtgcgtgagttgaaagagatgaaagatgggattggaaacata
tcaaggcgaggacttgaagggaaacattggcgtggcagggcaaggtcacatattgcacca
gatgaaacaccagctgaaactgatcagattgagcagggtcagtgggcgaatctaccgcca
gaattgcttttggatatcattaggagggtagaagagagtgaaacctcatggcctgctcgg
gcagttgttgttcattgtgcttcagtctgtaggtcatggagagaaattactaaggagatt
gtaaaaactcctgagcaatgtgggcggctgacatttcccatatcattgaagcagccgggt
catcgcgagtcgcccatacagtgctttattaagagggatactgctacttctacatttctg
ttgtactatggtctggtgccttctgagggtgagaatgataagttgcttttagcggccaga
aagatcagaagggcaacatgctcagatttcatagtatctttggtttcagatgatttttct
cgggccagcaacacatatgttggtaaattgaggtccaactttttgggaaccaagttcact
atgtatgattgtgaacctacatttgaagtgccaacgcaaacacaacatgctaaccggata
agtcgcagattccattctaggcaggtgtctccaagattacctgcatgtaactatagtata
ggcactatcacctatgagctcaatgttcttcgctcaagaggaccgaggagaatgcattgc
atgatgcactctattccaatgtcttccattgaggaggggggcactgtcccaacactaact
tcattaacagagacatttggtggccagtttcctcacctgtcaacttcaaaagggaaggaa
tcagtctcagatattagttccccaagcccctctcaatcaccagtactaacccaaggttca
gaagagcccctggttcttaaaaacaaggcccctagatggcatgagcagctacagtgctgg
tgcttaaatttcagaggtcgtgtcactgttgcttctgttaagaacttccaacttgtcgct
gctgttgaatcgtttcacaatgtgtcttctgcagatcaagaaagggtaattttacaattt
gggaaaattggaaaagacatcttcaccatggattatcgctatccactttcagccttccaa
gcttttgcaatctgcctgagcagctttgataccaaaccagcttgtgaatga
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