Populus trichocarpa (black cottonwood): 7495641 Help Entry 7495641           CDS       T01077                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03018   RNA degradation Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     7495641  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pop03019]     7495641 Messenger RNA biogenesis [BR:pop03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      7495641   mRNA degradation factors    5'-3' decay     Decapping complex      7495641 SSDB OrthologParalogGFIT Motif Pfam:  TFIIA Motif Other DBs NCBI-GeneID:  7495641 NCBI-ProteinID:  XP_002308825 UniProt:  A0ACC0SRY3 LinkDB All DBs Position 6:complement(1474766..1482692) Genome browser AA seq 789 aa AA seqDB search MERSDGKDFKEFTDSSSGALFDASRYEFFGQHAVEEVELGGLEDEGDNLVLGPADDEYRL FDRDEGVSLGSLSEIDDLASTFAKLNRVVTGPRNPGVIGDRGSGSFSRESSSATDWAQDG EFAGWLDQQMFCAENDQDSKRWSSQPQPSSARFSESKPLYRTSSYPLQPLQQPHFSSEPI PVPKSNFTSFPPPGASPHHLNVASLSGGLQSHLSAPNLSPLSNSNLHLAGLQHGLHYGGN LPQIMSPGLSFNNRPQKHWPNHAGLLHVDQSRLLESILQQQLSHQNGLMSAHLMSPQQQL QQQRLHSSLQPSLAHFAAMQSQLFNSHPSSLHIRDQKHKSSSQRNRRFSQGSDTGSQKSD SGWVQFRSKHMTADEIESILKMQHAATHSTDPYIDDYYHQASIAKKSTGSRIKHNFCPSH MKELPSRSRNSADQHSHLHFDALGKIPLPPIRKPRPLLEVDSPSSGDGNSEQISERPLEQ EPMLAARITIEDSLSLLLDVDDIDRFLQCNQSQDGGAQLRRRRQNLLEGLAASLQLVDPL GQTGQSVGLASKDDIVFLRLVSLPKGQKLICKFLQLLFPGNELTRVVCMAIFRHLRFLFG GIPSDTDAADTTTNLTKTVSACVNGMDLHALSACLVAVVCSSEQPPFRPLGSPAGDGATV ILKCLLERASKLLHGPQASANCAMPNFALWQASFDEFFDLLTKYCLIKYDTILHSVYAKT PPSTEGIDLEVRAATKQEMPVELLRACLPHTNERQMELLRHFGQQRNASTGLSAHPGNSG HINSESVRS NT seq 2370 nt NT seq  +upstreamnt  +downstreamnt atggagcgatctgatggcaaagatttcaaagaattcactgattcttcttcgggtgcactc tttgatgcttcacggtacgaattttttggtcaacatgctgtggaagaagtggagttgggt ggtttagaagatgaaggtgacaatcttgtgcttggacctgctgatgatgagtatcgtttg tttgatagagatgaaggtgtaagtttaggatctttatctgaaattgatgatctggcaagt acttttgcaaagttgaacagagttgtaaccggaccaagaaatccaggagttattggtgac agaggatctggatcgttttcaagggaaagttcatctgctactgattgggcacaagatgga gagtttgctggctggttagatcaacaaatgttttgtgcagaaaatgatcaggacagcaag agatggtcatcacaaccccaaccttcttctgctcgtttctcagaatcaaagccattgtac agaacttcctcgtatcccctgcagccactgcagcagcctcacttctcaagtgaaccaatt cctgtacccaaatcaaatttcacatctttccccccacctggtgcttctccacaccacctc aatgttgcttctctttctggtggactgcagtcgcacttgtctgctccaaacctctctcct ttgtccaactctaatcttcatctggctggtttacagcacgggttacattatggtggaaat ctgccccagatcatgtctcctggcctttcttttaataataggccacaaaagcattggcct aatcatgctggtctattacatgtagatcagtctaggctcttagagagtatattgcaacaa caactatcgcatcaaaatggcctaatgtctgcccatttgatgtcaccacagcagcaattg caacagcagagactgcactcttcacttcaaccatcactggctcattttgccgcaatgcaa tctcaactctttaattcccatccttcatcattgcatatcagggatcaaaaacataaatca tcctctcaaagaaaccggcgcttttcgcaagggtctgacactggtagtcagaaaagtgat agtggctgggtgcaattccgatccaagcatatgacagctgatgaaatagagagtatactg aaaatgcagcatgctgccactcatagcactgacccatatatagatgattactaccaccaa gcttctattgccaagaaatctactgggtcaagaattaaacacaatttctgcccatctcac atgaaggagctcccttctcgatctcgtaacagtgcagaccagcattctcatctccatttt gatgctcttgggaagattcctctcccacccatacgtaaacctcgcccccttcttgaagtt gattctcctagttctggtgatggaaactctgaacaaatctctgagaggcctttggaacag gaacctatgcttgcagctagaatcactattgaagatagcttatctcttcttcttgatgta gatgatattgatcgtttcctgcagtgtaatcagtcccaggatggtggggctcagctcagg cgtaggcggcagaacttgcttgaaggcttggcagcatcactccagcttgttgacccactt ggccaaactggccaatctgttggactggcctcgaaggatgacattgtgttcctgcggtta gtatctcttcccaagggtcaaaagcttatctgcaagtttctccagcttctattccctggc aatgaactcacccgtgttgtctgcatggctattttccgtcacttgagatttttgtttggt ggcattccctcggatacggatgcagctgacacaactacaaatctcacaaagacagtttct gcatgtgtaaatggcatggatcttcatgcattgagtgcttgcctggttgcagtagtttgt tcttcagagcagccaccttttcggcctcttggtagtcctgctggggatggggccacagtt attttgaaatgtcttcttgaaagagctagtaaactattacatggtcctcaggcttctgcc aactgtgctatgcccaattttgctctttggcaggcatcatttgatgaattttttgatctt cttacgaagtactgcctgattaaatatgacaccatactgcattcagtctatgcgaagaca ccacctagtacagaaggtattgatttggaggtgcgtgcagctacaaaacaagaaatgccc gttgagcttttacgagcttgccttcctcatacgaatgaacgccagatggagctcttaaga cattttgggcagcaacgcaatgccagcactgggctgagtgcacatccagggaatagtggt cacataaactctgaatcggtgaggagttga

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