Populus trichocarpa (black cottonwood): 7495669
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Entry
7495669 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7495669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7495669
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7495669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
AAA_14
TIP49
RNA_helicase
Mg_chelatase
TsaE
Sigma54_activat
AAA_7
AAA_24
IstB_IS21
AAA_18
Parvo_NS1
NB-ARC
AAA_30
NTPase_1
nSTAND_NTPase5
ATPase_2
AAA_3
NACHT
DUF3450
DUF5906
AAA_33
ABC_tran
AAA_25
ATPase
SSP1
AAA_11
AAA_17
DUF6570
AAA_19
Motif
Other DBs
NCBI-GeneID:
7495669
NCBI-ProteinID:
XP_002307945
LinkDB
All DBs
Position
6:1928393..1932349
Genome browser
AA seq
412 aa
AA seq
DB search
MSTMVLDPRPAPTVEPRSDLVPDPTTVPMEDDDLYSRFKSLQRQLEFIDIQDEYVKDEQK
NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQTNGIVGSTTGSNYYVRILSTIDRELLKP
SASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLT
HHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRM
VRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVK
VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDMEDYVSR
PDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatggtacttgacccgagacccgccccgacggtggagccaagatcggacctt
gtacccgacccaacaacagtacccatggaggacgacgacctctacagccgctttaaatct
ctgcaacgacagctagaattcatcgacatacaagacgagtatgtcaaggatgagcagaag
aatctgaagcgagagctacttcgtgcgcaagaagaagtgaagcggatccagtcggtgccg
cttgtgatcgggcagtttatggagatggtggatcagactaatgggattgttgggtctact
acgggttcgaattattatgtgaggattttgagtacgattgatagggaattgttgaagccg
tcggcttctgtggctttgcatcggcattcgaatgctcttgttgatgttttgccacctgag
gctgattctagtatttctctgcttagtcagagtgagaaacctgatgttacttataatgac
attggaggatgtgacattcaaaagcaggaaattcgtgaggcggttgagttgccactgact
caccatgaactttacaaacaaattggtattgacccccctcgtggtgtgttgctctatggt
ccacctggaactggaaaaactatgctcgccaaggctgttgctaatcatacaactgcagcc
tttattagagttgttggctctgagtttgttcagaagtatctgggtgagggaccccgcatg
gttcgtgatgtttttcgtcttgctaaagagaacgccccagcaattatttttattgatgag
gtagatgctattgctactgctaggtttgacgctcaaactggagctgatagagaagttcag
cgtattctgatggaactactgaatcagatggatgggtttgatcagacggtaaatgttaag
gtcataatggcaactaatagggctgacactttggaccctgctcttctgcgtcccggaaga
cttgaccggaaaattgaatttcctttgcctgatagacggcaaaagaggcttgttttccag
gtttgcactgcaaaaatgaatttaagtgatgaggtggacatggaggattatgtgtctcga
cctgataaaattagtgctgccgagatcgcagctatctgccaagaagcaggcatgcatgca
gtacgcaagaacaggtatgtcattctccccaaggacttcgagaaaggctaccgaaccaat
gtgaagaagcctgacactgactttgagttctacaagtga
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