Populus trichocarpa (black cottonwood): 7495682
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Entry
7495682 CDS
T01077
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7495682
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
7495682
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Motif
Other DBs
NCBI-GeneID:
7495682
NCBI-ProteinID:
XP_002307957
UniProt:
B9H8R3
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Position
6:2163200..2164846
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AA seq
435 aa
AA seq
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MEQQFLSLFESAKTSADAAVTSSSMIPEVHRCLAALGQLKRFPVISSRVLLFTPVAKQVE
CLTRHPVKMIKTAASCLLYTWRRKLYARHPTIDGKTQLTKSGGVSRNGTLIVKMRGRILG
RVEVGMPIKTVKNEEKKIKETETGLSCFKKPPLVPAKQTRKPEEKVENTISCIKKPLLAP
AKKIIKPAGKVESIKSGFKKPPQASAKGVTVQEKEKSFSGFKKPPQASAKGVTVQEKEKS
FSGFKKPPQASAKGVTVQEKEKSFSGFKKLPQASTTCVTAQEKVKGFGSFNKPSKEPVKC
DDALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPLCVAADVESVMFQKMGAFNGAKTV
KYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQFENAQIRMKSLLKEK
KKAGQEYKSVDPVES
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacagtttctgtcgttgtttgagtcagcaaagacatctgcagatgctgcagtc
acttcttcttcgatgattcctgaagttcatcgatgcctagccgctctgggccaactcaag
aggttccctgtaatatcatctagggttcttctcttcactcctgtcgcgaaacaggttgaa
tgtctcacaagacaccctgtaaagatgatcaagactgctgcttcttgcttgctctatact
tggagaagaaaactgtacgcaagacaccctaccattgatggaaaaactcagctgacgaag
tctggcggtgtgtcaaggaacgggactctcattgtcaagatgcgcggaagaatactagga
agggttgaagttggcatgcctatcaagactgtaaagaatgaagagaagaaaataaaagag
acggaaacgggtctgagctgtttcaagaaaccgccactagtacctgccaagcaaaccaga
aaacctgaggagaaggtggaaaatacaataagctgtatcaagaaaccactacttgcacct
gccaagaaaatcataaagccagcagggaaagtggaaagtatcaagagcggtttcaagaaa
ccaccacaagcatctgccaagggcgtcacagtgcaagagaaagaaaaaagtttcagtggt
ttcaagaaaccaccacaagcatctgccaagggcgtcacagtgcaagagaaagaaaaaagt
ttcagtggtttcaagaaaccaccacaagcatctgccaaaggcgtcacagtgcaagagaaa
gaaaaaagtttcagtggtttcaagaaactaccacaagcatctactacgtgcgtcacagcg
caagagaaagtaaaaggttttggtagtttcaataagccatcaaaagaacctgtcaagtgc
gatgatgctttacgaggcaaggtccgatccattcttgtggaatcactgaccagagttgcc
aaggaaactgaagcaggcttgaggagagcagtaagctcgcgtgacccattatgtgttgct
gcagatgttgaatcggtaatgtttcagaagatgggggcattcaatggcgccaagacagtg
aagtacaggtctgttctgttcaacttgaaggatccaaagaatccagatttgagaaggaaa
gttcttctgggacagattaagccagagaaacttgtgactatgacatcagaagagatggca
agcaatcataggcaattcgagaatgcacaaatccggatgaaatctttgctgaaggagaag
aagaaagcaggacaagagtacaaatctgttgatcctgtggaatcttga
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