Populus trichocarpa (black cottonwood): 7495691
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Entry
7495691 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7495691 isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00280
Valine, leucine and isoleucine degradation
pop00650
Butanoate metabolism
pop01100
Metabolic pathways
pop04146
Peroxisome
Module
pop_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
7495691
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
7495691
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7495691
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
7495691
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
7495691
NCBI-ProteinID:
XP_024460483
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Position
6:complement(2368489..2374916)
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AA seq
420 aa
AA seq
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MITTKALSKFSRSCSFLHHRNFVPMKPILDGATTNDMAPTNSFLKGVNDTREAVSWSGQT
RRMSQRGFLNHSRSILGWNSMEIDNVHDALRLPSRHFSTYYNDKLRRESTNELFSSIPEY
VKIVEVGPRDGLQNEKDIVPTAVKVELIKMLASSGLPVVEATSFVSPKWVPQLADAKDVM
EAIRDFKGARFPVLTPNLKGFEAAIAAGAKEVAVFASASEGFSKSNINCSIEDSLVRYHE
VALSASKLSIPVRGYISCVVGCPVEGMVSPSKVAYVAKKLCDMGCYEISLGDTIGVGTPG
TVIPMLEAVIDVVPIEKLAVHFHDTYGQALSNILASLQMGISTVDSSVSGLGGCPYAKGA
SGNVATEDVVYMLNGLGVKTNVDLQKIMLAGNFIRKHLGHSSGSKTAIALSKITAHASKL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgataaccacaaaggctctctccaagttttctcggagttgcagtttcttacatcatcgt
aattttgtcccaatgaaacccatcttagatggcgcaacaacaaatgatatggcacccaca
aactcttttttaaaaggtgtaaatgatacaagagaggcagtctcttggagtggacaaaca
agaagaatgtctcaaaggggtttcttgaatcattcacgttcaatattgggttggaattct
atggaaattgataatgttcatgatgctttgcgcttgccaagtcgtcattttagtacttat
tacaatgacaaactcagaagggaatcgacaaatgagctttttagcagcattccagaatat
gtgaagatagtggaagttggtccaagggatggattgcaaaatgagaaggatattgtacct
actgctgttaaggttgagctgatcaaaatgctagcttcttcagggttgcctgttgttgag
gccacgagttttgtttccccaaaatgggtaccgcagctagcagatgcaaaggatgtaatg
gaagcaatcagagattttaaaggtgctcgatttccagtcttaactcctaatctaaaaggc
tttgaagcagctattgcagctggagccaaggaagtggctgtctttgcctctgcttcggag
ggtttctcaaaatcaaacatcaattgcagcattgaagatagtcttgttcgttatcatgaa
gttgccctctctgccagcaagctttcaattcctgttcgtggctatatatcatgtgttgtg
gggtgtcctgtagaaggcatggtttctccatctaaagttgcatatgtggccaaaaagctt
tgtgacatgggatgctatgaaatttctcttggtgatacaattggagttggtactcctggc
actgtcatcccaatgctcgaagctgttattgatgttgtccctattgaaaagcttgctgtc
cactttcatgatacttatgggcaagctctttcaaatattctagcatcacttcaaatgggg
atcagcacagttgattcatcagtttctggtctggggggttgcccatatgctaaaggtgct
tctgggaatgttgccactgaagatgttgtttacatgctcaatggtcttggggtcaagacc
aatgtggatctgcagaagatcatgttggctgggaatttcatccgcaagcatttgggacac
tcatctggttcaaaaacagcaattgccttgagcaaaatcacagctcatgcctccaaactt
taa
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