Populus trichocarpa (black cottonwood): 7495778
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Entry
7495778 CDS
T01077
Name
(RefSeq) ATPase family AAA domain-containing protein FIGL1 isoform X1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7495778
03400 DNA repair and recombination proteins [BR:
pop03400
]
7495778
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
7495778
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
7495778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
FIGL1_N
AAA_lid_3
Vps4_C
AAA_5
AAA_22
TIP49
RuvB_N
AAA_16
AAA_14
IstB_IS21
Mg_chelatase
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
7495778
NCBI-ProteinID:
XP_024458075
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All DBs
Position
1:complement(33977283..33983384)
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AA seq
677 aa
AA seq
DB search
MAGKEEPVPFSSLLKPKVEDPPDSQICWRKQVDENLKRLHSLQFGADLALEKRDFSAAHL
LSLRLLGFLDSHSLSDADEALTRTIRRDAVSKLDSARRSLALESDRRAFEQAGRGLGQVF
SRKGDIDIEKIKQSKYFRALLQKYNIKLSNKLDDRKDRQEKLSCSTSKVMPQANLASLYG
NNTSKANNGFHKSMLNPKSNISEDHMIIEKPHSHNNHPKGYSLSSFIKLQEEERGYGNAV
GSKRSHVEISSPRNDSANSPTNNEENNTDGSGNGFVTARAKLEMDAKQKHGLAGSPSTSV
SPQSDSTNRGYGARSYGFSRRGVRGNFIPPIKSNGGNTGNVTTRVAGKSDDASDDSAKRC
LEMLCGPDGELPEKLRNLEPRLIEHISNEIMDRDPNVRWDDIAGLDHAKKCVTEMVIWPL
LRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKL
VRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGSEQILL
IGATNRPQELDEAARRRLTKRLYIPLPSLEARAWIVRNLLEKDGLFKLSKDEINTICSLT
EGYSGSDMKNLVKDASMGPLREALKQGIEITKLKKEDMRSVTLQDFEDALQEVRPSVSSN
ELGTYDEWNKQFGSLSL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaaagaagagccagttccattttcttctcttctgaaaccgaaagtggaagat
cctccagactctcagatttgttggagaaaacaagtcgacgagaacctgaagaggctccac
tcgctccaattcggcgccgatttagctctcgagaagcgcgatttctcggcggctcatttg
ctctctcttcgccttctcggcttcctcgactcacattctctttctgatgccgatgaggct
ctcactcggactatacgccgtgacgccgtatccaagctcgactcggctcgccgatccctc
gctcttgaatctgatcgtcgagcatttgagcaagcaggtagaggtcttggccaggttttt
agcagaaaaggagatattgacattgagaagatcaagcagtcaaagtactttcgtgctctt
cttcagaagtataatataaagctttcaaataaattggatgacagaaaggataggcaggaa
aaattgagctgcagtacatcaaaggttatgccacaagcaaatttggcatccctgtatgga
aacaacacctccaaagcgaataatggcttccataagagtatgttgaaccccaaaagtaat
atctctgaggatcacatgattatagaaaagccccactcacataacaaccatcctaaagga
tacagtctttctagttttataaaacttcaagaggaagaaagaggttatggaaatgctgtg
gggtcaaaacgttcacatgtggaaatcagcagccctagaaatgacagcgcaaattcacca
acaaacaatgaagaaaataatactgatggttctggcaatggatttgttactgcaagagct
aaactggaaatggatgcaaagcaaaaacatggcctggcaggatcaccaagtacatctgtc
tccccacaaagtgatagcacaaacagaggatatggtgcgagatcatatgggttttcacgc
cgtggtgttcgaggtaattttattccacccataaaatctaatgggggcaatactggaaat
gtgactacaagagttgctggaaagagcgatgatgcatcggatgactcggcaaagagatgt
ttggaaatgctatgcggtcctgatggtgaacttcctgaaaagttgaggaatttggaacct
cgtctcattgagcatattagtaatgagattatggatcgagatcctaatgttcggtgggat
gatatagctggcctggatcatgcgaaaaaatgtgtgactgagatggttatatggcctttg
ttacgtcctgatatatttaaagggtgtcgttctcctggaagaggtctgcttctctttggt
ccaccgggaacaggaaaaacaatgatagggaaagcaatagctggggaggctaaagcaacc
tttttctacatttctgccagttcattaactagcaagtggattggggagggtgaaaagtta
gtgagggcgttatttggtgttgccagttgtcgtcagcctgctgtaatttttgttgatgaa
atagactcccttctgtctcagcgaaagtcagaaggtgaacatgaatcaagtagacgactg
aaaacacagttcctcattgaaatggaaggctttgacagtggtagtgagcaaattctactt
ataggagcgacaaatcgaccccaagaactggatgaagcagcacgtagacgccttactaaa
aggctttacatccccttaccatcgttagaagcaagagcctggattgtacgtaatctctta
gagaaggatggactattcaagctttccaaggatgaaattaataccatatgtagtttgact
gaaggatattcaggatcagacatgaaaaacttagtgaaggatgcatccatgggtccgcta
agagaagctctcaaacagggcatagaaattaccaagctgaaaaaggaggatatgcgatca
gttactcttcaggattttgaagatgcattgcaagaagtgaggccctccgtttcttcgaat
gaactcggtacgtatgatgaatggaacaaacaatttggaagtttatctctctag
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