Populus trichocarpa (black cottonwood): 7495829
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Entry
7495829 CDS
T01077
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00071
Fatty acid degradation
pop01100
Metabolic pathways
pop01212
Fatty acid metabolism
pop04146
Peroxisome
Module
pop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
7495829
00071 Fatty acid degradation
7495829
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7495829
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
7495829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7495829
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
7495829
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
7495829
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of breast milk
7495829
Exosomal proteins of breast cancer cells
7495829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7495829
NCBI-ProteinID:
XP_024451886
LinkDB
All DBs
Position
1:complement(33127345..33140036)
Genome browser
AA seq
752 aa
AA seq
DB search
MTTATPLSASSFSSNRMAMVSSTFSSDYYGTGAADITKRHAAFQFLVSRYHFNNSKMFLQ
KQRNYGFSARRGFRVSCETKTEEIKIRRCSPNLESALVSRNGALTSDDWRAVPDIWRSSA
EKYGDQVAVVDPHHDPPTSMTYKQLEEEILDFSEGLRVIGVKPDEKLALFADNSYRWLVA
DQGMMAMGAVDVVRGSRSSVEELLQIYNHSESVALAVDNPELFNRIAETFSSKAAPRFVI
LLWGEKSSLTINVMEGIPIFNYKEIIDLGRESRKAFFDSGDARQHYKYETISSDDIATLV
YTSGTTGNPKGVMLTHKNLLHQINNFWEIVPAQPADRFLSMLPPWHAYERACEYFIFANG
AEQVYTTVRNFKVDLQQYQPHYLISVPLVFETLYSGIQKQISKSSTLRKLLAFTFIKISL
AYMEMKRIYEGTYLTRSQNEQSYFVSILGWLRARIFAAILLPVHMLAEKLVYSKIQSAIG
IRKAGVSGGGSLPAHVDKFFEAIGVVLLNGYGMTESSPVLAARQLSNNVLGSVGHPIRHT
EFKIVDAETGKSLPYGSKGIVRVRGPQVMKGYYKNPLATKQAVDEDGWLNTGDLGWIAPY
HSRGKSRRCGGIIVLEGRAKDTIVLSTGENVEPLELEEAAMKSSLIQQIVVIGQDQRRLG
AIVVPNKEEVLEVAKKLSIVDADATELSKKQIANLLDKELRKWTSEASFQIGPVLVIDES
FTIDSGLMTPTMKIRRDKVVALYEEQIANLYK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgactactgctacaccactttctgcttcttctttttcatcaaatcgaatggcaatggtt
tcttcaacttttagctctgattattatggtactggcgccgctgatattactaaaaggcat
gctgcttttcagttcttggtctctcgctatcatttcaacaactctaaaatgttccttcag
aaacaacgaaactatgggttctctgcacgtcgaggatttcgagtttcttgcgaaaccaag
acagaggagattaagataagaaggtgttcacctaacctagaaagtgcactagtttccaga
aatggtgccttgacctctgatgactggagagcagttcctgacatttggaggtcttcagca
gagaaatatggcgatcaggttgcagtggtagatccgcatcatgatccacctacaagtatg
acttataaacagctggaggaggaaattttagatttttctgaaggcctgagggttattgga
gttaagccagatgagaaacttgcactttttgctgataattcataccggtggcttgttgca
gatcaaggtatgatggccatgggagcagttgatgtggtgaggggatcaagatcatctgtt
gaagagctattacaaatatacaatcactctgaaagtgttgcacttgcagtggacaatcct
gaattgttcaatcgaattgcagaaacattttcttccaaggcagctcccagatttgtcatt
ctactctggggagagaagtcaagccttactatcaacgtaatggaggggatacctattttt
aattacaaggagataatagatttggggcgagagagccgtaaggctttctttgattctggt
gatgctaggcagcactacaaatatgaaacaataagctctgatgatattgctacacttgtt
tatactagtggaaccactggaaatccaaagggtgtgatgcttacacataagaatctgctg
caccagataaataatttttgggaaattgtgcctgcccaacctgcagacagatttctgagt
atgcttccaccttggcatgcatatgagcgagcttgtgagtatttcatatttgcaaatgga
gctgagcaagtatacacaactgtcagaaattttaaggttgatctgcagcaatatcagccg
cattacctaatctccgttcctttagtatttgagacactttatagtgggatacaaaaacag
atttctaaaagctcaactcttcgtaaacttcttgcatttaccttcataaagatcagcttg
gcatacatggagatgaagagaatttatgagggaacttatcttacaaggtctcagaatgaa
cagtcatattttgtttcaatactgggctggttacgggcaagaatctttgctgcaatcttg
ttgccagtacatatgttggctgagaagcttgtatacagtaaaattcagtcagcaatcgga
ataagaaaggctggtgttagtggaggtggtagtttacctgcacatgttgacaagtttttt
gaggcaattggagttgtgttgctgaatggatacggtatgacggagtcatctccagttcta
gctgctcgacaacttagcaataatgttcttggttcagttgggcatccaattcggcataca
gaatttaaaattgtagatgctgaaactggaaaatctcttccatatggttcaaaagggatt
gtaagagtcagggggccgcaagtgatgaaaggttactacaagaatccattggccacaaag
caagctgtagatgaggatggttggctaaacactggtgatttaggttggatagctccttac
cattcaagagggaaaagccgtcgctgtggagggattattgttcttgaaggtcgtgctaag
gatactatagttctttcgacaggtgaaaatgttgagcccttggagcttgaggaagctgca
atgaagagtagtcttattcaacagattgttgttattggccaggaccaacgtcgtcttgga
gctatagttgttccaaacaaagaggaggttctagaggttgcaaaaaagttgtccattgta
gatgcagatgccactgagctgagtaagaaacagatcgccaacctgctagacaaagaattg
aggaagtggacatcagaggcttcttttcaaattggaccagtccttgttatcgatgagtct
tttacaatcgacagtggcttgatgaccccaacaatgaaaatccgaagagacaaagttgta
gcgctatacgaagaacagatagccaatctctacaagtag
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