KEGG   Populus trichocarpa (black cottonwood): 7495977
Entry
7495977           CDS       T01077                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pop01002]
    7495977
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pop03110]
    7495977
Peptidases and inhibitors [BR:pop01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   7495977
Chaperones and folding catalysts [BR:pop03110]
 Other chaperones and cochaperones
  AAA proteases
   7495977
SSDB
Motif
Pfam: Peptidase_M41 AAA PPR PPR_2 PPR_3 PPR_1 AAA_lid_3 E_motif FtsH_ext PPR_long TIP49 AAA_5 RuvB_N AAA_16 AAA_17 nSTAND3 AAA_33 AAA_22 Mg_chelatase AAA_28 IstB_IS21 AAA_14 AAA_2 ABC_tran AAA_7 Transcript_VP30 Parvo_NS1 DUF5906 AAA_18
Other DBs
NCBI-GeneID: 7495977
NCBI-ProteinID: XP_002324060
UniProt: B9IJY7
LinkDB
Position
17:complement(9663215..9672252)
AA seq 1157 aa
MAPALSLSLPHIPICKSQDLANDVQIPKSTNRDSPSLKTPLVLDIKLSKRELLNATSVVL
LSEGLSVAKPARAAEPESPVTSTSSRMSYSRFFEYLDEGAVRKVDLFENGTVAIAEIFNP
TLEKIQRVKIQLPGLPQELLRKLEEKNVDFAAHPTEPNWTAALLDSLGNLAFPLILLGSL
LLRTSSTNTPGGPGLPFGLGRSKAKFQIEPNTGVTFDDVAGVDEAKQDFQEIVEFLKTPE
KFAAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRD
LFNKAKANSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFSGNSGVIVIA
ATNRPEILDSALLRPGRFDRQVTVGLPDVRGREEILNVHSKNKKLDKGVSLSVIAMRTPG
FSGADLANLMNEAAILAGRRGKYKITLKEIDDSIDRIVAGMEGTKMTDGKCKTLVAYHEV
GHAVCATLTPGHDLVQKVTLIPRGQARGLTWFIPGEDPTLISKQQLFSRIVGGLGGRAAE
EVIFGESEITTGAAGDLQQITQIAKQMVTMFGMSELGPWALTDPAAQSSDVVLRMLARNS
MSEKLAEDIDSSVRNIIERAYEIAKEHIRNNREAIDKLVEVLLEKETLSGDEFRAILSEF
TDIHVDKIDRTPNHCISLLKLSSSVKHVSQIHAQILVSGLQQDTNLLTELIRFCSLSPSK
HLSYAHSLLYNSLDSLPPWNFLIRGYASGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKA
CATCLALEEGKQVHADIFKFGLDCDVYVNNNLVHLYGSCKRIWDACKVFDEMPVRSIVSW
NSVITACVQNLWLGDAIWNFVKMKDFGFEPNETTMVIMLSLCAQIGNLSLGRWIHSQVIE
RGMTLNCQLGTALVDMYAKSGDLGYAKLVFDRMEKKNVWTWSAMILGLAQHGFGKEGLEL
FLKMKESVSICPNYVTFLGVLCACSHAGLVDEGFRYFYEMEHRHGIRPMVIHYGAMVDIL
GRAGNLEEAYNFLMDVPFQPDPILWRTLLSACNIHNANVSDGLVDKVRKKLLELEPRRSE
NFVIIANMYADAGMWETATNVRRTMRDGGLKKIGGESCIVLEGSIHQFFSGCSKDDHESI
ELLLDGLNLNMKMVNSL
NT seq 3474 nt   +upstreamnt  +downstreamnt
atggcacccgctctatctctttctctcccccacattcccatttgcaaatctcaggacctt
gcaaatgatgtccagattcctaaaagcactaacagagacagcccatctctcaaaacaccc
ctagtcctagatatcaaacttagtaagagagaactacttaatgccacttctgtagtactc
ttaagtgaaggactctctgttgctaagcctgcaagagctgcagagccagagagtccagtt
acttcaacttcaagtagaatgtcttactccagattctttgagtacttagatgaaggtgct
gtaagaaaagtggacttgtttgagaatgggacggtagcaatagctgagatttttaatccc
acacttgaaaagatccagagggtcaaaatccagttaccaggactgccacaagagttgttg
aggaaactagaagagaagaatgttgattttgctgctcacccaacagagccgaactggaca
gctgctctacttgactcgttgggaaacttggcctttccattgatattgctcggctctttg
ttgttaaggacatcatctaccaacacccccggaggtcccggcttgccatttggactagga
aggagcaaagccaaattccagatcgagcctaatactggagtgacatttgatgatgttgct
ggagttgacgaagcaaagcaagattttcaagaaattgtggaatttttaaaaactccagag
aagtttgctgcagtaggtgcaaggattcctaagggagttctgttagtaggacctccagga
actggaaaaaccttgctagctaaagcaatagctggagaagcaggcgttcctttcttttct
ctgtcaggatcagagtttattgagatgtttgttggtgtaggggcttcaagagttagggac
ttgttcaacaaggctaaggcgaactcaccatgcatagtttttatcgatgagatagatgct
gtcgggaggcagagagggacaggaattggtggaggaaatgatgagagggagcagacactg
aatcaattacttactgaaatggatggttttagtggtaatagtggagtgattgttattgct
gctacaaaccgacctgaaattcttgattctgctttgcttaggccaggaagatttgatagg
caggtcacagttgggctaccagatgtgagaggaagggaggagatattaaacgtgcatagc
aaaaacaagaagctggacaaaggggtctctctgagcgttattgccatgaggacgccagga
ttcagtggtgcagacttggctaacctaatgaatgaagcggcaattcttgctggtaggaga
ggcaaatacaagatcaccctgaaagagattgatgattcaatcgatcgaatcgtggcaggc
atggagggaaccaagatgactgatggaaagtgcaaaactttggtggcttaccatgaagtt
gggcacgctgtttgcgcgacattgacacccggacatgacctggtgcagaaagtcactcta
attccccgggggcaagctcgtggtctaacgtggttcataccaggtgaggatccgactctc
atttccaagcaacagctattttctaggatagttggaggacttggaggaagagcagcagag
gaagtgatttttggtgaatcagaaatcacaactggtgcagcaggggacctgcaacagatc
actcaaattgctaaacagatggtaacaatgtttggcatgtctgagctcggaccatgggca
ctgaccgatccagcagcacagagcagtgatgtggtgctaaggatgctagctagaaactcc
atgtcagagaaactcgcagaagatatcgattcatcagtgcgaaacataattgaaagagca
tatgagattgctaaggaacatataaggaacaatagggaggccattgataaactagtggag
gtgctgctagaaaaggaaaccctctctggggatgagttcagggcaatcttgtctgaattc
acagatattcatgttgataaaatagatagaacccctaaccattgcatctctctactgaaa
ctctcatcttcagtcaaacatgtctctcaaatccatgcacagatcctagtctctggtctt
caacaagacaccaatcttttaactgaactcataagattctgttccttatctccctctaaa
cacctcagttatgcccattcccttctatacaattcacttgactcactgcctccttggaat
ttcctcattagaggctacgcctcgggtgatgcaccgaaaaatgccatacgggtgtttcat
agaatgcgaaaagaaggagttggacccaataactttaccttcccttttgttttgaaggca
tgtgctacttgcttggcacttgaagaagggaaacaagtacatgcggatatttttaagttt
ggtttagattgcgatgtttatgttaacaacaatttggttcacttatatgggtcttgtaag
aggatttgggatgcatgtaaagtgtttgatgaaatgcctgtaaggagtatcgtttcgtgg
aattcggtgattactgcttgtgttcagaatttatggttaggagatgcaatttggaatttt
gttaaaatgaaggactttgggtttgagcctaatgagacgacaatggtgattatgctttcc
ctctgcgcacaaatagggaacttgagcttagggagatggattcattctcaagtgattgaa
agggggatgacattgaattgtcaattgggcactgcccttgttgacatgtatgcaaaaagc
ggagatcttggttacgctaagctagttttcgatagaatggagaagaagaatgtttggact
tggagtgcaatgattttgggactagctcaacatggatttggaaaagaagggcttgagctt
tttctcaagatgaaagagagtgtttctatttgcccaaattatgtcacattcctaggggtt
ctctgtgcttgcagtcatgctggtttggttgatgaggggtttcggtacttttatgaaatg
gaacacaggcatggaattagaccaatggtcatacattatggtgccatggttgatatcctg
ggtcgtgctgggaatcttgaagaggcttataactttttaatggacgtacctttccagcct
gacccaattttgtggaggacattgctcagtgcatgcaatattcacaatgctaatgtcagt
gatggcttagtagataaggtaagaaagaagttgcttgaactagagcccaggaggagtgag
aactttgtgataattgcaaacatgtatgctgatgctgggatgtgggaaacggcaacaaat
gtgcggaggactatgagagatggtggtttgaagaagataggtggcgagagttgcattgtt
ttagagggctcaatccatcagttcttttctggctgttcaaaagatgatcatgaaagtatc
gaactgcttctagatggactgaacttgaacatgaaaatggtaaactccctgtaa

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