Populus trichocarpa (black cottonwood): 7496051
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Entry
7496051 CDS
T01077
Name
(RefSeq) Golgi SNAP receptor complex member 1-1
KO
K08495
golgi SNAP receptor complex member 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7496051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7496051
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
7496051
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
Baculo_PEP_C
P22_AR_C
NET2A_C
MnmE_helical
Bap31_Bap29_C
DUF6634
MscS_porin
Not3
COG5_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
7496051
NCBI-ProteinID:
XP_002299264
UniProt:
B9GMC1
LinkDB
All DBs
Position
1:complement(3468383..3473087)
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AA seq
226 aa
AA seq
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MEVTTTSSWDALRKQARKLEAQLDEQMNSYRKLASSKGSTKVDSAENDPESGIDRLLKQL
QQVNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFHRLRSGMRAKQEHALLLEDFREF
DRTRLDLEDGVGSADQALLREHASISRNTGQMDNVISQAQATLGSLVLQRSTFGGINSKL
SNVSSRLPTVNQILSAIKRRKSMDSIILSLVASVCTFLIFIYWVTK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgactactacttcttcatgggacgctttacgcaaacaggcgaggaaactcgaa
gctcagttagatgagcagatgaactcatatcgtaaactggcatcctcaaagggttctaca
aaagttgattctgcagagaatgatcctgaatctgggatagaccgactattaaaacagctc
caacaagtaaattcacagatgcaagcatgggtatcatctggaggatcagaaatggtttct
cacaccttgactcggcatcaggaaattcttcaagatcttactcaggagtttcatcgcctc
cgttctggcatgagggctaagcaagaacatgctctgcttctggaggattttagagagttt
gatcgaacaagattagatttggaagacggtgttggttctgcagaccaagctctccttaga
gagcatgcatccattagccgaaataccggtcagatggataatgtgatttcacaagctcaa
gcaactcttggttctcttgttcttcaacgttcaacttttggaggaattaattcaaagctg
agtaatgttagcagccgcctcccaacggtaaatcaaattctgtcagcaataaagaggaga
aagtctatggattccatcatactttccctggttgcttccgtatgcacttttcttattttt
atttactgggtgaccaagtaa
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