Populus trichocarpa (black cottonwood): 7496059
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Entry
7496059 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7496059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7496059
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7496059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_25
AAA_16
AAA
AAA_28
DO-GTPase2
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
7496059
NCBI-ProteinID:
XP_002297807
UniProt:
B9GMD6
LinkDB
All DBs
Position
1:3581550..3589120
Genome browser
AA seq
1449 aa
AA seq
DB search
MESADIYRASSSLRGSFRGGSSAWRNTTVEAFSRSSREEDDEEALTWAAIEKLPTYDRLR
KGILTSASKGVANEVDIEKLGVQERKQLLERLVKVAEEDNEKFLWKLKDRVERVGIDVPT
IEVRYDNLNIEAEAYVGSSALPSFAKFTFNIIEGLLISLNILRNRKKPLTILKDVSGIVK
PSRLTLLLGPPSSGKTTLLLALAGKLDPNLKFSGRVTYNGHEMNEFVPQRTAAYISQHDL
HIGEMTVRETLAFSARCQGAGYLHDMLAELSRREKEANIKPDPDVDVFMKAVASQGEEAN
VITDYVLKILGLEVCADTMVGDEMIRGISGGQRKRVTTGEMLVGPSRALFMDEISTGLDS
STTYQIVNSLRHTVHILNCTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRERVLEFF
KHMGFECPERKGVADFLQEVTSRKDQEQYWARKDQPCRFITANEFAEAFQSFSVGRRTAE
ELSIPFDKSKNHPAALVTKTHGAGKKDLLKANFSREYLLMKRNSFVYIFKICQLTIMALI
SMTLFFRTEMHRDTVADGGIYTGALFFTAIMIMFNGMSELSMTIAKLPVFYKQRDLRFFP
SWAYAIPQWILKIPVAFVEVGVWVFLTYYVIGFDPNVGRLFKQYLLLLLINQMASALFRF
IAAAGRNMIVANTFGSFALLTLFALGGFILSREKIKKWWIWGYWISPLMYGQTAIVVNEF
LGNSWSHVPENSTEPLGIQVLKSRGFFTEAYWYWIGAGATIGFILLLNLFFVLALTFLNA
FDKPQAVISDEPESDESGRKTERAIQLSNHGSSHGTNTEGGVGISRASSEAIGRVSNNRK
KGMVLPFEPLSITFDDVIYSVDMPQEMKIQGVVEDRLVLLNGVNGAFRPGVLTALMGVSG
AGKTTLMDVLAGRKTGGYIDGEIKISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLY
SAWLRLPPEVDSETRRMFIEEVMDLVELNPLRHALVGLPGVNGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG
GQEIYVGPLGRHSTHLIKYFEAIEGVSKIKDGYNPATWMLEISSSAQEMALEVDFSNIYK
NSDLFRRNKALIVELSTPAPGSTDLYFPTKYSTSFLTQCMACLWKQHWSYWRNPPYTAVR
FLFTTFIALMFGTMFWDLGSKVDSTQDLFNAMGSMYAAVIFLGVQNASSVQPVVAVERTV
FYRERAAGMYSALPYAFAQVLIELPYIFVQAAVYGIIVYAMIGFEWTVVKFFWYLFFMYF
TLLYFTFYGMMAVAMTPNHHIAAIVSSAFYGIWNLFSGFIIPRPSMPIWWRWYSWACPIA
WTLYGLVVSQFGDIQKDLTETQTVKEYVKDYFGFDHDFLGVVAAAIVGWTVLFAFIFAFA
IKAFNFQRR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgctgatatttatagagctagtagtagtttaagaggtagtttcagaggaggt
tcttcagcgtggagaaacactacggtggaagcattttcaagatcttcaagagaagaagat
gatgaagaggctctaacatgggctgcaattgagaaacttcccacttatgatcgattaaga
aaaggtatattaactagtgcatcgaaaggtgtagctaatgaagtagatattgaaaagctt
ggagtccaagagagaaaacagttgcttgagaggttggtcaaagttgcagaagaggataac
gagaagttcttgtggaagctcaaggaccgtgttgaaagggttggcattgatgttccaaca
attgaagttcggtacgataatctaaatatcgaagcagaagcatatgtagggagtagtgct
ttgccttcatttgctaagttcacttttaatataatagagggtttattgatttctcttaat
atccttcgaaatagaaagaaaccactcaccatccttaaggatgttagcggaatcgtcaag
ccatcaagattgactttgcttttgggtcctccaagttctgggaagaccacactgttgttg
gcattggctgggaaacttgatcctaatctgaagttttctggtcgtgtgacttataatggt
catgagatgaatgagtttgtaccacaaagaacagcagcctatatcagtcaacatgatctc
cacataggagaaatgaccgtaagggaaactttggcgttctctgccaggtgccaaggggct
ggatacttgcatgacatgttggcggagttgtccagaagagagaaagaagccaacattaag
cctgatcctgatgttgatgtcttcatgaaggcagtagcatcacaaggtgaggaggccaac
gtcatcaccgactatgtcttaaagatactaggattggaagtctgcgcagacactatggta
ggtgatgaaatgataaggggtatctctggaggacaaaggaagcgtgttacaactggtgaa
atgctggttggaccatcaagggcattgtttatggatgagatttctaccggcttggacagc
tcaacaacttaccaaattgtgaactcattaaggcatactgttcacattctcaattgcacc
gctgtcatctcacttctccagccagcacctgagacttatgatctctttgatgacattatt
ctcctttcagacggccaaattgtgtaccaggggcctcgtgaacgtgtgcttgaatttttt
aaacatatgggcttcgagtgccctgaaagaaaaggcgtggctgactttttgcaagaagtg
acatcaaggaaagatcaagagcagtactgggcacgaaaagatcagccttgcaggtttatc
acagccaacgaatttgctgaggcttttcaatcgttcagtgtgggacggaggaccgcggag
gagctttcaataccgtttgacaagtccaagaaccatccagctgctttggtaaccaaaact
catggagctggaaagaaagatctgcttaaagctaacttctctagagaatacttgctcatg
aagaggaactcatttgtctacatcttcaagatttgccaacttacaataatggcactcatt
tcaatgacactcttctttcggactgagatgcatcgagatacagtcgcggatggtggaatt
tatactggtgctctgttcttcactgcaataatgatcatgtttaatggtatgtcagagcta
tccatgaccatcgcaaagcttcctgtgttttacaagcaaagagacctccgattctttcct
tcatgggcatatgcaattcctcaatggatcctgaaaattcccgtcgcatttgttgaagtt
ggtgtatgggtgttcctaacctattatgtgattggatttgatcctaacgttggaaggctt
tttaagcagtacttgctgcttttgctaattaaccagatggcatctgcattatttcgattt
atcgctgcagctggaaggaacatgattgttgctaacacctttgggtcatttgcgctactt
acactttttgcattgggtggcttcatcttgtcacgagagaaaataaagaaatggtggata
tggggttattggatttcaccattgatgtacgggcagacggcaatagtagtgaatgagttc
cttggaaatagttggagtcatgttcctgaaaactccacagaaccactaggaatacaagtt
ttgaagagtcgtgggttcttcacagaagcatattggtattggataggagcaggggcaaca
ataggattcatattactattaaatctcttcttcgtactggctctcactttcctcaatgca
tttgataagcctcaggctgttatatctgacgagcctgaaagtgatgaatctggtcgcaaa
accgaacgagctattcagctatcaaaccatggaagtagtcacggaacaaacacagagggt
ggagttggaattagcagagctagttcagaggccattggcagggtcagcaataacaggaag
aaaggaatggttcttccatttgaaccactttccatcacatttgatgatgttatttactcc
gttgacatgccacaggaaatgaaaattcaaggagttgttgaagatagattggtgcttttg
aatggtgtgaatggagctttcaggcctggtgtccttacagctttgatgggtgttagtggt
gctggaaaaacaactttgatggatgtgttagctggtaggaaaactggtggatatattgac
ggagaaatcaaaatttcagggtacccaaagaagcaagaaacttttgctagagtttctgga
tactgtgagcaaaatgacattcactctccacaagttactgtttatgaatccttactctac
tcagcttggcttcgtctaccacctgaagttgactctgaaaccagaaggatgttcattgag
gaagtcatggatcttgtggagttgaatccattgcgccatgcattagtagggttgcctggt
gtgaatggtttgtccaccgagcagcgcaagcggctaaccattgcagttgagctagttgca
aacccctctatcatattcatggatgagccaacttcagggctagatgctagagctgctgca
attgtgatgagaacagttaggaacactgtggacacaggaagaacagttgtatgcaccatc
catcagcccagtattgacatatttgaagcttttgatgagctattcctgatgaaacgagga
ggacaagagatatatgtggggcctctgggtcgccattctacccatctaataaaatatttt
gaggcaattgaaggagtcagcaaaattaaagatggttataatccagcaacttggatgctg
gaaatttctagttcagcacaagaaatggctttggaggttgatttttctaacatctacaag
aattcagatctgttcaggagaaacaaagcactcattgtggaattaagcacacctgctcct
ggctcgacagacctttatttccctacgaagtactcaacatcatttctcacacaatgtatg
gcttgcttatggaagcaacattggtcatattggaggaatccaccatacactgccgtgaga
tttcttttcacaacctttatagccttgatgtttgggacaatgttctgggaccttggctcc
aaagtggatagtacccaagatcttttcaatgcaatgggttcgatgtatgcagctgttatt
ttccttggtgtccaaaacgcatcatccgtgcagccagtggtggctgttgaaagaactgtc
ttctacagagaaagagctgctggaatgtattcagctttgccatatgcctttgcacaggtc
ctgatcgagcttccgtatatttttgttcaagctgcagtctacggcattatagtttatgcg
atgattggatttgaatggactgttgttaagttcttttggtatctgttctttatgtacttc
acattattatacttcaccttctacggaatgatggctgttgcaatgactccaaaccaccac
attgctgccatagtttcctctgcattttatggaatatggaacctattctcagggtttata
attcctcggcccagcatgcctatatggtggagatggtactcctgggcttgtccaatagca
tggaccttgtatggattggttgtatcacagtttggagatatacagaaagaccttaccgaa
actcaaacagtgaaagaatatgtgaaggattattttggtttcgaccatgattttcttgga
gtagtcgcagcggcaattgttgggtggactgtcctctttgctttcatatttgcctttgct
atcaaggctttcaacttccagaggcgatag
DBGET
integrated database retrieval system
