Populus trichocarpa (black cottonwood): 7496067
Help
Entry
7496067 CDS
T01077
Name
(RefSeq) cellulose synthase-like protein D1
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7496067
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7496067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
7496067
NCBI-ProteinID:
XP_024459313
LinkDB
All DBs
Position
1:3803879..3809035
Genome browser
AA seq
1043 aa
AA seq
DB search
MATSTKPKAKNLSSQASTAGRPQQAVKFARRTSSGRIASFSHDEDLDLSGEFSGQNDYIN
YTVVMPPTPDNQPAWPSSENKSDGPTSRFGSEAQNASRRVGEQEDNYGSRGGNGRSNDNS
KTERGMSIMKSNNRSLLSRSQTGDFDHNRWLFETKGTYGVGNAYWSDQDKYGQDSELSKS
DFLDKPWKPLSRKIRVPAAILSPYRILVVIRLVLLCFFLGWRVQNPNRDAMWLWGLSIVC
EIWFAFSWLLDIFPKYNPINRSTDLAALRDKFEQPSPANPHGRSDLPGVDIFVSTADPEK
EPPLVTANTILSILAADYPVEKLSCYISDDGGAILTFEAMAEAVKFAEVWVPFCRKHDID
LRNPDSYFNQKTDHTKNKKRPDFVKDRRWMKREYDEFKVRINGLPEAIRRRSKSFNSKEL
KKAKSLAREKNGGVLPSEGVGDVPKATWMADGTQWPGTWLDQTADHKKGDHAGILQVMTK
VPENEKVMGQPDEKKLDFTGVDIRIPMFAYVSREKRPGFDHNKKAGAMNALVRASAILSN
GPFILNLDCDHYFYNCQAIREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFF
DGSMRALDGLQGPVYVGTGCMFRRYALYGFLPPRANEYLGMFGSTKRRAPGQLQDESEAQ
PLTSHPDLDLPKKFGNSAMFNESIAVAEFQGRPLADHKSVKNGRPPGALLLPRPPLDAPT
VAEAIAVISCWCEDKTDWGDKIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTA
PINLTDRLHQVLRWATGSVEIFFSKNNALFGSRRLKFLQRIAYLNVGIYPFTSFFLVTYC
FLPALSLFTGTFIVQSLDISFLIYLLTITVTLTLISLLEIRWSGIGLEEWWRNEQFWAIG
GTSAHLIAVIQGLLKVVAGVEISFTLTSKSAGEDEDDIYADLYIVKWTGLFFMPLTIIVV
NLVAIVIGCSRTLYSEIPEWGKLMGGLFFSFWVLSHMYPFVKGLLGRRGRVPTIVYVWSG
LISITVSLLWISITSENRGKLEV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcaacaaaacctaaagcaaagaatttgtcatcacaagcatcaaccgctggc
cgtcctcaacaggctgtgaaatttgcacgccggacatctagtggacgcattgccagcttt
tcacatgatgaggatttggacttgtctggtgaattttcagggcagaatgactacatcaat
tacactgttgtcatgccccccacccctgataaccagcctgcatggccatcctcagaaaat
aaatccgatgggcctacgagccgttttggttccgaggcacagaacgcttccaggcgggta
ggagagcaagaagataattatggaagccgtggtggcaatggccgcagcaatgacaactca
aaaacggaacgaggaatgtcgataatgaaatcaaataatagatcattactgtcaaggagc
caaacaggagattttgatcacaacaggtggttgtttgagacaaaaggaacctacggtgtt
ggaaatgcgtattggtcagaccaagacaagtatggtcaggattcagagctgagcaagtcg
gattttttggacaagccttggaaaccactctctaggaagattagggttccagcagctatt
ctcagtccttacaggatacttgtggtgatccgtttggtacttctatgtttctttcttggg
tggagagtccagaaccccaatcgtgatgccatgtggctgtggggcctgtctatcgtttgt
gagatttggtttgctttctcatggctgctagacatttttcccaagtacaaccccatcaac
cgatccactgaccttgctgctctgcgtgacaagtttgagcagccctcccctgcaaaccct
catggccggtcagaccttccaggagttgatatttttgtctccactgctgatcctgagaag
gaacctccacttgtcactgccaacacaattttatcgattcttgcagctgactaccctgtt
gagaagctctcctgctacatttctgatgatggtggtgccatactcaccttcgaggctatg
gctgaagctgttaaattcgcagaggtttgggtaccattttgtcgaaaacacgacattgat
ctgaggaatccggatagttacttcaaccaaaaaactgaccacaccaaaaacaagaaacgg
cctgattttgtcaaggaccgcagatggatgaagagagagtatgacgagttcaaggtcagg
attaatggtctgccagaggcaatacgaaggagaagcaaatcatttaactctaaggagctg
aagaaggcaaaaagtctcgccagggagaagaatggtggtgtgttgccatcggagggggtt
ggtgacgtccctaaagctacatggatggccgatggtacccagtggcctggcacatggcta
gatcaaacagcggatcacaaaaagggggaccatgctggtatcttgcaggtaatgactaag
gtcccagaaaatgagaaggtgatgggtcagccagatgagaaaaaattagatttcactgga
gttgacatcaggataccaatgttcgcatatgtatcgcgtgaaaagaggcctggctttgac
cacaacaagaaggctggagccatgaatgcattggttagagcttcagctatattgtccaat
ggaccgttcatactcaacttggattgtgatcattacttctataattgtcaagctataagg
gagggaatgtgctttatgatggaccgtggtggtgaccgcatatgctacatccagtttcca
caaagatttgaagggatcgacccctccgatcgatatgcaaatcacaacactgtcttcttt
gatggaagtatgcgagcactggatggtcttcaaggtccggtgtatgtaggaacagggtgc
atgtttcgtagatatgcactatatgggttcctcccaccaagggcaaacgagtacttgggc
atgttcggcagtacgaaaagaagggctccgggtcaattacaagatgagtcagaggctcag
ccccttacatcgcaccccgacttggacctgccaaagaagtttgggaattcagcaatgttc
aatgagtccatagctgttgctgaattccaaggacggccgcttgctgatcacaaatcggtg
aagaatggcaggcctcctggtgcacttctcctgccacgtcctcctctagatgcacccaca
gttgctgaagcaattgctgtaatctcttgctggtgtgaggacaagactgactggggggat
aagataggttggatttatggctcagtcacggaagatgtggtgactggttatcggatgcac
aaccgtgggtggcgatctgtgtactgcgtaacaaagagagatgccttccggggcacagca
ccaatcaacctcactgaccgccttcatcaggtgctacgatgggctactggttcagttgaa
atctttttctccaaaaacaatgccttatttggaagccggcgactgaaattcttacagcga
attgcatatctcaatgttggcatttaccccttcacctccttcttcttagtcacttactgc
ttcctccctgcgctttcccttttcacaggaaccttcattgttcaaagcctggatataagt
ttcctcatttacctcttaaccatcactgtaacactgactctcatctcccttcttgaaata
agatggtccggtattgggctcgaggaatggtggcgtaatgagcagttttgggccattggc
ggaactagtgctcaccttattgctgtgatccaaggccttctaaaagtcgtagctggtgtt
gagatttctttcacgttaacctcgaagtctgctggcgaggatgaagatgatatttatgct
gatctttatatcgtcaagtggacaggtctcttctttatgccacttaccatcatagtagtc
aaccttgttgccattgttattgggtgctcgaggacactatacagcgagataccagaatgg
ggcaagttgatgggaggactctttttcagcttctgggtgctgtctcacatgtatccattt
gtgaaaggcctgttgggaaggaggggaagagtaccgacaattgtttatgtctggtcaggc
ctgatttccattactgtgtctttgctttggatttcaatcactagtgaaaatcgtggaaaa
cttgaggtataa
DBGET
integrated database retrieval system
