Populus trichocarpa (black cottonwood): 7496081
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Entry
7496081 CDS
T01077
Name
(RefSeq) probable ribose-5-phosphate isomerase 3, chloroplastic isoform X1
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00030
Pentose phosphate pathway
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pop_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
7496081
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
7496081
Enzymes [BR:
pop01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
7496081
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Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
FAR1
DeoRC
Sugar-bind
Motif
Other DBs
NCBI-GeneID:
7496081
NCBI-ProteinID:
XP_002307978
UniProt:
B9H933
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Position
6:2656768..2661468
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AA seq
499 aa
AA seq
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MEDDSKMNVIVDTKVNVTVEKDIEGRNDKMVVDSDEVIVINIDEKESEGVGNDDEMKPPS
IGMVFNTPDEVRSYYDEYACHVGFNTIKKSTKSGDDGNVKYFTLACSRSGKELPSASQTN
RFNFRKRLPPRTNCKAKLNVTIGPDGRVYVCRVILEHNHELVPGLHGMKKKKSRAPRAKK
VGTGQSQVPHSVVHEAGSSANLKSDCAIPRIVTDPSQIIFGSSHLLTKRSVNRNVSSGSK
RRNSVFASPVLNQESTERILARKAVELVKSGMVIGLGSGTTISMVMEELGRLIREGKLKD
IIAVGGNYQSRVLATQFGVTVVDLSGVSKIDIAFDGVDEVDFNKNLLKCGGPAHTMQKVI
DSVASECIILVDQPKVVHRLGSAFPVPVEVLPPALTPVLKRLATLGGVPEIRFTSNENGP
LFTDLGNMVVDVSFPNGIQNPAELEKNIKLLPGVVENGIVTGVATTVLVAVKERGAVNVM
NLEDYVRTVLDRRDGTLTS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatagtaaaatgaacgtgatagtagatactaaagtgaatgtgacagtagag
aaagacatagaagggaggaatgataaaatggtagtcgatagtgatgaagtgatagttatt
aatattgacgagaaagagagtgaaggagttgggaatgatgatgaaatgaaaccccctagc
attggaatggtgttcaataccccagatgaagttcgatcctattacgacgagtatgcttgt
catgtggggtttaatacgataaagaaaagcacaaagtctggagatgatgggaatgtgaag
tattttacgcttgcgtgttcgcggtctggtaaggagttgccctctgctagtcagactaac
aggtttaattttcggaagaggttgccacctagaacgaattgtaaagccaagttgaatgta
accataggtcctgatggacgagtgtatgtctgtcgtgttattctcgagcataatcatgaa
ctggttccgggtttacatggtatgaaaaagaagaaatcaagggcccctcgagcgaaaaag
gtgggaacaggacaaagccaagtgccacattcagttgttcatgaagctgggagttctgca
aacctcaaatctgattgtgccataccaagaattgtcaccgatcccagtcaaataatattt
ggaagcagccatcttctcactaaacgttctgttaataggaatgtgtcaagtggttccaag
agaagaaattcagtatttgcaagccctgtgcttaatcaggaatcaacagagcgcatcctt
gcaaggaaagccgttgaacttgtgaagtctggaatggtaattggtctgggctcaggaacc
acaatatctatggttatggaggaacttggtagactaattagagaaggaaagttgaaagat
atcatagcagttgggggcaattatcaatcacgagttttggctacacagtttggagtcaca
gttgttgatttgagtggtgttagtaaaattgacattgcatttgacggggttgatgaagtg
gacttcaataaaaatctattaaagtgtggaggacctgcacataccatgcaaaaggtaatt
gattctgtggcaagtgaatgcatcatactagttgatcaaccgaaggttgttcaccggctt
ggcagcgcattccctgttcctgtcgaagttcttcctcctgccctcacacctgtgctgaag
cgtcttgctactcttggaggagttcctgaaattcgatttacctcgaatgagaatggtcca
ttgttcactgatcttgggaatatggttgtagatgtgagctttccaaatgggatacagaac
cctgctgaacttgagaagaacattaaattgttacctggcgtggttgaaaacggtatcgtt
actggagtcgctacaactgtgctggttgctgttaaagagagaggtgctgtcaatgtgatg
aatttggaagactatgtgagaactgtgcttgaccggagggatggaactttgacaagttaa
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