Entry |
|
Name |
(RefSeq) rhomboid-like protein 20
|
KO |
K25216 | ubiquitin-associated domain-containing protein 2 |
|
Organism |
pop Populus trichocarpa (black cottonwood)
|
Brite |
KEGG Orthology (KO) [BR:pop00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:pop04121]
7496084
Ubiquitin system [BR:pop04121]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
7496084
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:2681106..2687234
|
AA seq |
292 aa
MNGGPSGFNNAPVTRICVIASAIFSVFLGIKGGSNKLGLSYQDIFRNPRLWKLVLSVFAF
SSTPEMMFGLYLLYYFRVFERQIGSNKYSVFILFSVIVSLLFEVFAVTLLQDPLANLLTS
GPYGLIFASYVPFYFDIPVSTRFRVVGVHLSDKSFIYLAGVQLLLSSWKRSILPGICGIL
AGSLYRLNLFGIRKAKFPEFIASFFSRLSWPSTGSPRGATSRNVTGSAPSYAGRHVQRTY
PAPMAPSTEPSEDAIATLASMGFDRNSARQALVQARNDVNTATNILLEAQSH |
NT seq |
879 nt +upstreamnt +downstreamnt
atgaacggcggcccatctggtttcaacaatgcaccagttacaagaatatgtgttattgca
agcgctatctttagcgttttcttggggatcaaaggtggctctaacaagcttggattatcg
tatcaggatattttcaggaatccacgtctctggaagttagttttgtcagtttttgccttt
tcatctacaccagaaatgatgtttgggctatatcttctttactacttcagggtctttgag
agacagattggttccaacaagtactctgtctttattttgttctctgtgatagtctctttg
ctctttgaggtctttgctgtcacactccttcaagatcccttagccaaccttttgacatca
ggaccttatggtcttatatttgcttcatatgttcccttctactttgacattccagtatca
actcggtttcgagtcgttggagtccacctttctgacaagtctttcatatatctagctggt
gttcagcttcttttatcatcatggaaaagatcaattttgcctgggatatgtggtatcctt
gctggttccttgtatcgtctgaacctctttggcatccgtaaggcgaagttccctgagttc
atagcttcattcttctcacggctttcttggccatctacgggcagtccgcgtggagcaact
tctaggaatgtaacaggaagtgcaccatcctatgctggccgtcatgtgcagagaacctat
cctgctcccatggctccttccaccgagccatcagaggatgccattgctactctggcttct
atgggttttgataggaactcagctagacaggcacttgtgcaggctaggaatgatgtcaac
acagctacaaacatccttcttgaagcacagtcccactga |