KEGG   Populus trichocarpa (black cottonwood): 7496106
Entry
7496106           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7496106
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03010  Ribosome
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    7496106
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7496106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pop03011]
    7496106
   04121 Ubiquitin system [BR:pop04121]
    7496106
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7496106
Ribosome [BR:pop03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    7496106
  Archaea
    7496106
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   7496106
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7496106
  Exosomal proteins of colorectal cancer cells
   7496106
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UN_NPL4 Spt5_N
Other DBs
NCBI-GeneID: 7496106
NCBI-ProteinID: XP_002308918
LinkDB
Position
6:complement(3064782..3066255)
AA seq 147 aa
MQITVDIILGGKRITLDVASTDNISSVKAKIKETEGIPIEQQYLYYDSRLLLDTDILEHC
GVKNDDTLRLVNLEGLEQDDDDEDYDDDDDNDHGRQDPFTGVLLMSASVPRRRRRRSRRS
RPRRQDDVIIVYPPMPRPPPSPECKCQ
NT seq 444 nt   +upstreamnt  +downstreamnt
atgcagatcaccgtggacatcatacttggaggcaaacgaatcactctggacgtggcgagc
acagataacatctcgagcgtcaaggccaaaatcaaagaaacagaagggattcctattgag
cagcaatatttatattatgatagccggttgctgctcgacacggatatccttgaacattgc
ggggtcaagaacgatgatacacttcgtctagtcaaccttgaggggctcgaacaggatgac
gacgacgaggactacgacgacgatgatgacaacgaccatgggagacaagatccttttaca
ggtgtgttgctaatgagtgctagtgtccctcgtcgtcgtcgtcgtcgttctcgtcgttct
cgtcctcgtcgtcaagatgatgttataattgtttatccgccaatgccacggccaccacca
tcaccagaatgcaaatgtcaataa

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