Populus trichocarpa (black cottonwood): 7496120
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Entry
7496120 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7496120
KO
K09527
DnaJ homolog subfamily C member 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7496120
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP40 / DNAJ
7496120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
DnaJ
TPR_16
TPR_19
TPR_12
ANAPC3
Motif
Other DBs
NCBI-GeneID:
7496120
NCBI-ProteinID:
XP_006381002
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Position
6:complement(3262629..3272963)
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AA seq
1412 aa
AA seq
DB search
MSPAAAVDIRSPVTSKHPSSFQNPNSNPIENNHRHSVKAPVFGSASEIDMNENGSQIGLG
RARPRLVKVRRRLHGRNRGAAPGELCGSGSGFNPFKPASDDCCSSDSYLNGDSNVSNVGF
VFGANGGVKSGRLDLDLNSRVELDFKEKEFGGSVGQLREKEPTLDSKMEAGEFGNVGFVF
GANGNNVGVKFVSEKRQLNECGVNACEAENEKVRNDGDSESYDDRSELGSGLNTNEGYSS
GNGVKLGSDDVGFVSDATHDGTCTNMGVSGSGFVFGPSWFDGKLNSNEGQRESGESSGDS
AIADTGTMKVRHEAELYKVKGNGKGIFVSPSSSKKSSFLNESVVTKCPVEVKSSGETFLN
CSISMDQNGNLNSSVNDKCTFASFANSSNVASASSMNPIFNLPEDIKKLNINEFKNVHGT
DDKNSSAKDDSSFVFRSSKMVSASSIGSSGGDKFESSDKNRSCNTASTSIGISSSGLFTF
QAGCAQSSFEAQLSQDQVNDDTQLNGAAAQTSLSSGGFDSQVNNVVSEATTVAGVDKENN
ESSSTNTLGGLGMPFTDFKTPWDPSCLKTSLFPELNKKLEFTANSRSKKGKRSQMRIRLK
QDSLCKQQQEQEQDHVQNERSAQENLNTPTSYSPMDFSPYEETTAEKFSEETFVTSNDSN
HQENNRASSILHSTEIAGLRESGGLDTDKDDGKPREKMNPENSDSGSERCFMGDYISKEF
VFGAEMPCSGFNFVQVSSRDAGAAEDTHGLKTESSHQMQFSFASGSGDLDGRKFFFSASS
SEQISSSAPKRQFRKKYRRKNPCAPYVVAPNPNGQEEDLSTPQRKVGNKSEINELAKQGS
ISSTDSVQEACEMWRARGNRAYQNGDMSKAEDFYTSGINSIPSSEMSGCCLKPLVICYSN
RAATRMSLGNIREALRDCIKASGLDPNFLKVQMRAANCHLQLGEVEDALHYFSKCLESGA
GVCLDRRTTIEAADGLQKAQKVAECTNRSAKLLEERTYDAAVNALDAIGEALSISPYSER
LLEMKAEFLFMLQKYKEVIQLCEQTLCAAEKYFASVGADGQFVDIGCSESENCSFARVWR
WHLISKSNFYLGKLEVALDLLEKLEQMRSISYKYANANKILESSVTLAVTVRDLLRHKSA
GNEAVRSGRYAEAVEHYTAALSNNIESRPFSAICFGNRAAAHQALGQIADAIADCSLAVA
LDGNYSKAVSRRAALHEMIRDYGQAAIDLQRLVSVLENLSDEKVRQSSKPARSTSRTKEL
RQARQHLSLMEEEAKKGIPLDLYRILGVKDSDTAADIKKAYRKAALKHHPDKAGQFLARS
ESGHDRQLWKEIVQEVHADADRLFKMIGEAYAVLSDSSKRSEYDLDEEIRKASKENNGSS
HRRTYTRSNSNERNEYRRHWQDNWKTNGYSRW
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggctgcggccgtcgatatcaggtcacccgtcacctccaaacatccttcctct
ttccaaaaccctaattccaatccaatcgaaaataaccaccgccatagtgtaaaggctccg
gtttttggtagcgcaagtgaaatcgatatgaatgaaaacgggtcgcaaatcgggttgggt
cgggcgcggccgaggttggtgaaggtgaggaggcggttacatgggaggaacagaggagcg
gctccaggtgagttgtgcgggtccgggtcgggttttaacccgtttaaaccagcaagtgat
gattgttgtagcagtgatagttatttaaatggggatagtaatgtgtccaatgtgggtttt
gtgtttggtgcaaatgggggtgtaaaaagtgggaggttagatttggatttgaattctcga
gtggaattggattttaaagaaaaagaatttggtggaagtgtggggcaattgagagaaaag
gagccaactttggattcaaaaatggaggctggggagtttggtaacgtgggttttgtgttt
ggtgctaatgggaataatgtcggggtgaaatttgtttcagagaagagacaattgaatgag
tgtggtgtgaatgcatgcgaagcagagaatgaaaaggtcaggaatgatggtgacagcgag
tcttatgatgacaggagtgaattaggatcgggtttgaataccaatgagggatattctagt
ggaaatggtgtgaagttgggttctgatgatgtcggttttgtgtctgatgctactcatgat
ggaacttgtacaaacatgggggtttctggttcaggttttgtgtttggtccaagttggttt
gatggaaagttaaattcgaacgagggacagagagaatcaggtgaaagttctggagattca
gccattgctgatactgggacgatgaaggttaggcatgaggccgagctttataaagtgaaa
ggcaatggtaagggtatttttgtgtcacctagcagcagcaagaaaagttcctttctcaat
gaaagtgtggttacaaagtgccctgttgaggtcaagtcaagtggcgaaacttttttaaat
tgcagtatttcaatggatcaaaatggtaatctgaattctagtgtcaatgataagtgtacg
tttgcttcatttgcaaatagtagtaatgtagctagtgcttctagcatgaacccaatattt
aatctcccagaagatattaagaaacttaacattaatgagtttaagaacgttcatggaact
gacgataagaattcatctgctaaagatgattcttcatttgtattcagaagcagtaaaatg
gtttctgcctcttctattggaagttctggtggtgataaatttgaatccagtgacaaaaac
agaagttgtaatacggctagcacttctattggaatttcaagttcgggattatttacattt
caggcaggatgtgcacaaagctcttttgaggcccaattatctcaagatcaagtgaatgat
gatacacaactcaatggagctgctgctcaaacttcattgtcatcgggtggttttgactcc
caagtaaataatgtagtttctgaagcaacaactgtggctggagttgataaggaaaataac
gaaagtagttctacaaacacactgggtggattagggatgcccttcacagacttcaaaact
ccatgggatccttcttgtttaaaaacaagtctatttcctgaattaaataagaaactggaa
tttactgcaaatagcagatcaaagaagggcaaaagatcacaaatgaggatacggttgaag
caagattccttatgcaagcaacagcaagagcaagagcaagatcatgtgcaaaatgaaagg
agtgcccaagaaaatctaaatacccccaccagttactcacccatggatttttccccttat
gaggaaactacagctgagaaattttctgaagaaacttttgtgacatcaaatgattccaac
catcaagaaaataatcgtgcgtcctctatcttgcattcaaccgagattgctggtctcaga
gagagtggaggattagatactgataaagatgatgggaaacctagagagaagatgaacccg
gagaattctgattctggttctgaaagatgtttcatgggtgattacatctctaaagagttt
gtttttggagctgaaatgccctgctctggtttcaactttgtgcaggtcagtagcagggat
gctggcgctgctgaagatacacatggattaaagacagaaagcagccatcaaatgcaattt
tcctttgcttcaggatcgggagacctagatgggaggaaatttttcttttctgcttcatcc
tctgaacaaattagttcatcagcaccaaagcgtcagtttagaaagaaatataggaggaaa
aatccatgtgcaccatacgttgttgccccaaacccaaatggacaagaagaagatttatct
actcctcaaagaaaggtgggaaataaatctgaaataaatgaattagccaagcaaggctca
atctcatccactgactctgttcaggaagcatgtgagatgtggcgagcaagggggaatcgt
gcttatcaaaatggggatatgtctaaagccgaggatttttacacaagtgggataaattcc
attccttctagtgagatgtcaggatgctgcctcaagcctcttgttatttgctatagcaac
cgtgcagcaacacgaatgtctcttggaaacataagggaagctttaagagattgcataaag
gcttctggtctagatcccaactttttgaaagttcaaatgagggctgctaattgtcatctt
cagctgggagaagttgaggatgcacttcactattttagtaagtgcttggaatctggagct
ggtgtgtgtttagatcgaagaaccacgatagaagctgctgatggcttacagaaagctcag
aaagtagcagagtgtacaaatcgttctgcaaaacttttggaagagagaacatatgatgca
gcagttaatgctctagatgcgatcggcgaggccttgtcaattagcccctactcagaaaga
ttgctggaaatgaaagcggaatttctgtttatgttacagaagtataaagaggtgattcag
ctgtgtgagcagactctttgtgctgctgaaaaatattttgcttcagtaggtgcggatggg
cagtttgtggatattggctgttctgaaagtgaaaattgctcatttgcgagggtgtggaga
tggcacttgatttcaaagtccaacttttatcttggaaagcttgaggtggctcttgattta
cttgagaaattagagcaaatgagatccatcagttacaagtatgcaaatgcgaataagata
ttggaatcatctgttacattagctgtcaccgtacgcgatcttttacgtcataagagtgca
gggaatgaagcagttcgatcaggacggtatgcagaagctgtagagcattatactgctgct
ttatcaaacaacattgaatcccgccctttttcagcaatttgttttggaaaccgtgctgct
gcacaccaagcattggggcagattgctgatgccattgcagattgcagcctagctgtagcc
cttgatggaaattactcgaaggcagtttccagaagagcagccttgcatgagatgattaga
gactatggacaggcagctattgaccttcaaagacttgtatccgttcttgaaaatctatct
gatgaaaaagtcagacagtccagcaaacctgctagatccaccagtaggacaaaagaatta
aggcaagctcgtcagcatttgtcattaatggaagaggaggctaagaaaggaatcccattg
gatttatatcgtattttgggagtcaaagattctgacacggcagctgatataaaaaaggca
taccgcaaagcagctcttaaacatcacccagacaaggctggtcagttcctggcaagaagt
gaaagtggtcatgacaggcagctctggaaggaaattgttcaggaggttcacgcagatgct
gacaggctatttaagatgattggagaagcatatgcagtactctcagactcctcaaagcgg
tcagaatatgatcttgacgaggaaattagaaaagcatcaaaggaaaacaatggaagcagt
catagaagaacatacacgcgcagcaactcaaatgagagaaatgaataccgtcgacattgg
caggataattggaagactaatggttattcacgttggtga
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