Populus trichocarpa (black cottonwood): 7496126
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Entry
7496126 CDS
T01077
Name
(RefSeq) short integuments 2, mitochondrial isoform X1
KO
K19828
mitochondrial GTPase 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7496126
03029 Mitochondrial biogenesis [BR:
pop03029
]
7496126
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Other ribosome biogenesis factors
7496126
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
7496126
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AAA_16
Septin
AIG1
IIGP
MMR_HSR1_Xtn
ATPase_2
Motif
Other DBs
NCBI-GeneID:
7496126
NCBI-ProteinID:
XP_002308022
UniProt:
B9H9S8
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All DBs
Position
6:3376346..3379865
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AA seq
376 aa
AA seq
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MRSGLKGIVKKGIGEMGFNAGGGAINWFPGHMAAATRAIRDRLKLADLVIEVRDSRIPLS
STNEDLQPQLAAKRRVIALNKKDLANPNIMHKWIRYFDSCKQDCIPISAHSKSSVQKLLE
VVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFAVQGKKKRATVGPLPGV
TQDIAGYKIAHKPSIYVLDTPGVLVPSIPDIETGLKLSLAGSVKDSVVGEERIARYLLAV
LNTRGTPLHWKHWNNRKMDGIRYESEEKHKYDPKDLRPNMRKPPSVSDVVYVENLVTEVQ
CAMYKTLAEFNGNVEDENDLENLIEQQFEVLQKALKIPHKASEARLMVSKKFLTLFRTGK
LGCFILDDVPETNTVS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagggttaaagggaatagtaaagaaaggaataggagagatgggtttcaacgca
ggtggtggagccattaactggttccctggccacatggctgctgccacccgcgccatccga
gaccgcctgaaacttgccgacctagtcatagaagtccgtgactctcgtattccattatcg
tcaacaaatgaagacttacaacctcaacttgctgcaaaaagacgtgttattgctcttaat
aagaaggatttggctaatcctaatattatgcataaatggattcgttattttgactcgtgc
aagcaagattgcattccgataagtgcacacagcaagagttctgttcagaagcttcttgaa
gttgtggagttcaaactcaaggaggtgatatcgagggaacctactctccttgttatggtg
gttggtgttcctaatgttgggaaatcagctttgataaactcaatccatcaaattgcattg
tctcgctttgctgtgcaggggaaaaagaaacgagctacagtgggccctttgcctggtgta
actcaagatattgcaggatacaagattgctcataagcctagcatatacgtgctggacacc
ccgggcgtgttggttcccagtatcccagatattgaaacaggattaaagttatctcttgca
ggatctgtgaaagattctgttgtaggtgaggagcgtattgcccgatacttactagcagtt
ttaaatactcgaggcactccacttcactggaaacactggaataacagaaaaatggatggg
attcgatatgaatctgaggaaaaacacaaatatgatcctaaagatcttcggccaaatatg
aggaagccacctagtgtgtctgatgtggtgtatgttgagaatcttgtcacagaagtccaa
tgtgcaatgtacaaaacactggcagaattcaatggtaatgtggaggatgagaatgatttg
gagaatcttatagagcaacaatttgaggtgctgcagaaggcactgaagatacctcataag
gcatccgaagctcgcttgatggtatcaaagaagtttctcactctttttaggacaggtaaa
cttggttgtttcatccttgatgatgtccctgagaccaacactgtatcataa
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