Populus trichocarpa (black cottonwood): 7496402
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Entry
7496402 CDS
T01077
Name
(RefSeq) PP2A regulatory subunit TAP46
KO
K17606
immunoglobulin-binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7496402
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7496402
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7496402
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Other PP2-interacting proteins
7496402
Membrane trafficking [BR:
pop04131
]
Autophagy
Other autophagy associated proteins
Others
7496402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP42
HIM1
FeS
Motif
Other DBs
NCBI-GeneID:
7496402
NCBI-ProteinID:
XP_002318432
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Position
12:complement(1868515..1872457)
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AA seq
405 aa
AA seq
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MGEMKTEDMPLPSLFDEASKIHVKATESGSSDQELVKKGIESLEKCEEMISKLGLFSSNE
TKEDISTTNLKYILVPFYLAELAEKITQDDRIQILKASQAKLKEFLSFCEAMELVPEEEL
QASSQGAPNTFVDRRALKIARYKRQRAAEAKLEEIKEWKERRGRSTKAAAVSTPVEAGEE
DVLDDDGEEEREAWITTISLAICKAIDLLEMLKKEEEMLLAVKERQLKEGGKAFSQTILD
ERAKKAENWHRDAAVKARYTQPAQPITCATFAQDVLEGRAKVSQAHDHKHVPITFGPASL
VGGSLTSERERMRAQVFQPGHRLPTMSIEEAGLKEMEIMNKWQERNAELMEEANSAWYKD
NPKSKLSEEDDDEDDDAAVQKARAWDDWKDDHPRGAGNKKLTPCG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaatgaaaacggaggacatgccccttccttccctcttcgatgaagcttcaaaa
atccatgtaaaagcaaccgaatctggttccagtgatcaggaattggtgaagaagggaatc
gaatctctggagaaatgtgaggaaatgattagtaaactgggtctgttttcttctaatgag
actaaggaggatattagcactacaaatctcaagtatattctggtgccattctatctggca
gagctggctgaaaaaattacgcaggatgataggatacaaattttaaaggcttcccaagca
aagttaaaggaattcctctcattttgtgaggcaatggaacttgtaccggaggaggagttg
caagcatcttctcaaggggctccaaatacttttgtagatcgaagggccctaaagattgcc
agatacaaacgccaaagagctgctgaggcaaagctggaggaaataaaggagtggaaagag
aggcgtggtcgttcaactaaagctgcagcggtatcaactccagtcgaggcaggggaggaa
gacgtgctggatgatgatggagaagaagagcgagaggcttggattactaccatctctttg
gctatttgtaaggcaatcgatctactggaaatgttaaagaaggaggaagaaatgcttttg
gctgtaaaggaaagacaactaaaggaagggggcaaagctttttcccagactattcttgat
gaacgtgccaagaaagctgaaaattggcatcgtgatgctgcagtgaaagcaagatatact
caaccagcacagcctatcacatgtgctacttttgctcaagatgttctagaagggagagca
aaggtttcgcaagcacatgatcataagcacgtgccaattacatttggaccagcaagtctt
gtgggtggaagcctaactagcgaaagggaaaggatgagagcacaggtcttccaacctggc
cataggttaccaaccatgagcatagaagaagccgggttaaaggagatggagattatgaat
aaatggcaagagagaaatgctgaactcatggaagaagccaactctgcatggtacaaggac
aatccaaaatcaaaactcagtgaagaagatgatgatgaagatgacgatgctgctgtgcag
aaagcaagagcatgggatgactggaaagatgatcatcctcggggtgctggcaataagaag
ctcaccccttgtggttaa
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