| Entry |
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| Name |
(RefSeq) chromatin structure-remodeling complex protein BSH
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| KO |
| K11648 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 |
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| Organism |
pop Populus trichocarpa (black cottonwood)
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| Pathway |
| pop03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:pop00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
7496492
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7496492
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:pop01009]
7496492
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pop03021]
7496492
03036 Chromosome and associated proteins [BR:pop03036]
7496492
Protein phosphatases and associated proteins [BR:pop01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
7496492
Transcription machinery [BR:pop03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
7496492
SWI/SNF complex
7496492
Chromosome and associated proteins [BR:pop03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
7496492
PBAF complex
7496492
SWI/SNF complex
7496492
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(370326..373189)
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| AA seq |
244 aa
MKALPSSSSKGPVKFRVPTRENLVPIRLDIELEEQRYKDAFTWNPTDPDSEITIFAKRTV
KDLKLPPPFIMHIVQSIQTQLAEFRSYEGQDMLYTGDKIVPIKLDLRVNNTLIKDQFLWD
MNNFESDPEDFAKTFCDDLGIQDPEVGPAVAFAIREQLYETAVQSVAAAREIRMSKKGRR
GAEYVPASKAGGTSLDLMKLFNNKYSVVRKRKDWDVYGPMVDLLSNEEVDALEAREERNA
RSMI |
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| NT seq |
735 nt +upstreamnt +downstreamnt
atgaaagcgctgccttcatcgtcttcaaaagggcctgtcaagttcagggtgccaacaagg
gagaacttggtgccaattcgtctggacatagaattagaggagcagcgttacaaagatgcc
ttcacatggaatcccacggatccagactctgagattaccatcttcgctaaaagaactgtc
aaagacttgaagcttcctcctccttttattatgcacattgttcaatccatacagacgcaa
ttggccgagtttcgatcctatgaaggtcaagatatgctgtacactggagacaagattgtg
cctattaagcttgatcttcgcgtgaataacactcttataaaggatcagtttttgtgggac
atgaacaactttgaaagtgatcccgaagactttgctaaaaccttttgcgacgatttgggt
attcaagaccctgaagttggacctgcagttgcctttgctattagggaacagctttatgag
actgcagttcaaagtgtagctgctgcaagagaaatcagaatgagtaaaaagggacgtcgt
ggtgccgaatatgttcctgcaagtaaagcaggtggtacttcattggatttgatgaagttg
ttcaacaacaaatacagtgtggttcggaaaagaaaggattgggatgtgtatgggcctatg
gttgatctcttatcaaatgaggaagtagatgcccttgaagcgcgggaagagaggaatgct
cgatctatgatttga |
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