Populus trichocarpa (black cottonwood): 7496525
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Entry
7496525 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: probable beta-1,4-xylosyltransferase IRX10
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7496525
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7496525
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Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
7496525
NCBI-ProteinID:
XP_002304637
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Position
3:complement(17154388..17157981)
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AA seq
413 aa
AA seq
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MRVCLWFFVVVIVFGFGDGKNADQRLRTERISGSAGDVLEDNPVGRLKVYVYELPSKYNK
KLLQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPIYPTCDLTPTGLPLPFN
SPRMMRSAIQLLSSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATL
VQTFGQRNHVCLNEGSITIPPYAPPQKMQAHQIPLDTPRSIFVYFRGLFYDVNNDPEGGY
YARGARAAVWENFKNNPLFDISTDHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGC
IPVIIADDIVLPFADAIPWEEIGVFVAEEDVPHLDTFLTSIPPEVILRKQRLLANPSMKR
AMLFPQPAQPGDAFHQILNGLARKLPHDRTVYLKPGQKVLNWTAGPAGDLKPW
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgtgcttgtggttttttgttgtggttattgttttcggttttggtgatggaaaa
aatgctgatcaaaggctacgcacagagaggatttcaggaagtgctggggatgtgttggaa
gataatccagtgggaagattgaaagtctatgtttatgagcttcctagtaaatacaacaag
aaattactgcagaaggaccccagatgtctcactcatatgtttgctgctgaaattttcatg
catagatttctcttatccagcccagtccgaacccttaatccagaagaagcagattggttt
tatacccctatataccccacttgtgacctcacacctactggcttgccgttgcccttcaat
tctccaaggatgatgagaagtgcaatacagcttctctcctccaattggccttactggaat
cgtacagaaggggctgatcacttctttgttgtgccccatgactttggagcctgcttccac
tatcaggaagagaaagccattgagcggggcattcttccactactccggcgtgctacttta
gttcaaacttttgggcagcgaaaccatgtgtgcttgaatgaggggtcaattacaattcct
ccgtatgctcctcctcaaaagatgcaggcccaccagattccccttgacactccgcggtca
atttttgtttacttccgcggattgttttatgatgtaaataatgatccggaaggtggttat
tatgcaagaggagcaagggctgcagtttgggagaatttcaaaaacaatccactctttgac
atctccaccgatcatccaacaacatattatgaagacatgcaacgagctatattttgcttg
tgcccactcggttgggccccatggagtcctagactggtcgaagcagtggtattcggatgc
attcctgtaattatagcagatgatattgttttaccatttgccgatgctatcccatgggag
gagattggagtgtttgtagcagaggaagatgtccctcacctggacacattcctgacatct
ataccaccagaagtgattttaaggaaacaaaggcttcttgcaaacccttccatgaaacgt
gcaatgttattcccacaacctgcacaacctggtgatgctttccaccaaatactgaatggg
ttggctcgtaagttgccgcatgacaggactgtctacttgaaacctggtcagaaggttttg
aattggacagcaggaccagctggggacctgaaaccttggtaa
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