Populus trichocarpa (black cottonwood): 7496527
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Entry
7496527 CDS
T01077
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7496527
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7496527
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7496527
03029 Mitochondrial biogenesis [BR:
pop03029
]
7496527
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
7496527
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
7496527
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
7496527
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
7496527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
7496527
NCBI-ProteinID:
XP_002304639
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All DBs
Position
3:complement(17169767..17174313)
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AA seq
732 aa
AA seq
DB search
MRILISLVSSSTLIDLLSFSRRLHTKISPFSTLIHHKPSPAMAASEDSLRRALAEKQSSI
ESQGNTVRALKASNAEKATVDEAIEKLNALKLDKSVMEKQLQAAVNGNGPDGSVNKEAFR
QAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLSFWRQHFVLEENMLEVDCP
CVTPEVVLKASGHVDKFTDLMVKDEKTGTCCRADHLLKDFCNEKIQKDLSISAEKAAELK
HVLAILDDLSAEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLSPGYMRPET
AQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPEYK
SHPKYSEVADLEFLMFPRELQISAQSAKKIQLGEAVSKGIVNNETLGYFIGRVYLFLTRL
GIDKDRLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLHAHSEKSGVPL
VAHEKFSEPKEVEKLVIAPVKKELGLAFKGNQKKVVEALEAMNEKEALDMKASLETKGEV
EFYVCTLGEKVTIKKNMVSISKEKKKEHQRTFTPSVIEPSFGIGRIIYCLYEHSFYMRPS
KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEDVAKIISKTLTAAGISHKIDITGTSIG
KRYARTDELGVPFAITVDSISSVTIRERDSKDQIRVDVEEAAPVVKSVTDGHKTWADVWA
NFPHHSSGSVED
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcatttctctggtttcctcgtcaactctaatcgatttactctctttctct
cgccgcctacacaccaaaatatcccctttctcaaccctaatccaccacaaaccttcacca
gccatggccgcctccgaggactcgcttcgacgcgctctcgccgagaaacaatcctcgatc
gaatctcaaggcaacactgtccgcgcactcaaagcctctaatgctgaaaaggctaccgtc
gacgaggcaattgaaaaattgaacgcgttgaaactagacaagtccgtgatggagaaacaa
cttcaagctgccgttaatggtaacggtcctgatggttctgttaataaggaagcattccgt
caagctgtggtaaatacgcttgaacggaggttgttttatatcccttcttttaagatttat
cgtggtgtcgctgggctttatgattatgggcctcctggttgcgccgtcaagtctaatgtt
ctttctttttggcgccagcattttgttcttgaggagaatatgttggaggttgattgccca
tgtgtgacgcctgaggttgtccttaaagcatctggtcacgtggataaattcacggacctt
atggttaaggatgaaaaaactgggacttgctgtcgtgcggatcacttgcttaaggacttt
tgtaatgagaagattcagaaagatcttagcataagtgcagagaaggctgcagaactgaaa
catgtacttgctatcctggatgatctctctgctgaagagctgggggcgaagatcaaggag
tatggtattacagcaccagacacgaagaatccactttccgatccttatccattcaacttg
atgtttcaaacatcaatcggtccttctggtttgagccctgggtatatgcgccctgaaaca
gctcagggcatatttgttaattttaaggatttgtactattacaatgggaacaagctcccc
tttgctgctgctcaaattggtcaggctttcagaaatgagatttctccccgccaaggcctt
ttaagagtccgtgaattcacattagcagagattgagcactttgtcgatcctgagtacaaa
tctcacccaaaatactctgaagttgcagatcttgaattcctgatgttcccaagagaacta
caaatctctgcccagtctgcaaagaaaattcagcttggtgaagctgtttctaagggaatt
gtcaacaatgaaactctcggctatttcattgggagagtgtatcttttcctaactcgtctt
ggtatagacaaagaccgattgcgattccggcagcatcttgcaaatgaaatggcccactat
gccgcagactgttgggatgctgagattgagtcttcatatggttggattgagtgtgttggt
attgcagatagatctgcatatgacttgcatgctcactcggaaaaaagtggagttcctctt
gtagcccacgaaaaattttcagaaccgaaggaggtggagaaattggttatagcaccagtg
aagaaagagctggggcttgcttttaagggtaaccaaaaaaaggtggttgaagctttggag
gcaatgaacgaaaaagaagctttggacatgaaggcctctctggaaaccaaaggagaggta
gaattttatgtttgcactcttggggaaaaggtaacaattaagaagaacatggtgtcaatt
tcaaaggagaagaagaaggaacaccaaagaactttcacgccatcagtaatcgaaccatct
tttggcattgggcgtataatctattgtctctatgagcactctttctacatgaggcccagt
aaagctggggatgagcagctgaatgttttccgttttcctcctcttgtggcacctataaag
tgcactgtgtttccactcgtccagaatcagcagtatgaggatgttgccaaaatcatttct
aagacgttgactgctgctggaatctctcataagattgacattacaggtacctcaatcggt
aaacgatatgcaagaacagatgaactgggggttccctttgcgataacagttgattcaata
tcctctgtgacaatcagggagagggatagcaaggatcaaatccgtgttgatgtggaagaa
gcggcaccagttgtgaagtcggtaactgatggacacaagacatgggctgatgtgtgggct
aatttccctcatcactcctctggatctgtagaggattag
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