Populus trichocarpa (black cottonwood): 7496528
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Entry
7496528 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7496528
03036 Chromosome and associated proteins [BR:
pop03036
]
7496528
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7496528
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7496528
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
7496528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
PHD
zf-RING_6
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
zf-RING_10
DUF3673
DUF1266
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
7496528
NCBI-ProteinID:
XP_002303746
UniProt:
A0A2K2B813
LinkDB
All DBs
Position
3:17181936..17186580
Genome browser
AA seq
673 aa
AA seq
DB search
MELPCDGAGICMVCKNKPPSEETLACKTCVTPWHATCLVSPPQALSDTLQWECPDCSMIH
PPSTSAFASGRSEDSGDLIASIRKIEDDKSLTEQEKAKKRQELLSGAAAGPSSLDGEEKK
EKNDVLDILDKELTCSFCMQMLDRPVTTPCGHNFCLKCFQRWIGQGKRTCAYCRVQIPPK
IASQPRINSTLVIAIRMARMSRSSNAGGAAKVYHFVHNQNRPDKAYTTERAKKAGKANAC
SGKIFVTVAPDHFGPIPAENDPERNMGVLVGEIWEDRLACRQWGAHLPHVAGIAGQSTYG
AQSVALSGGYIDDEDHGEWFLYTGSGGRDLSGNKRTNKDQSFDQKFDKMNEALRLSCLKG
YPVRVVRSHKEKRSSYAPETGVRYDGVYRIEKCWRKNGIQGFKVCRYLFVRCDNEPAPWT
SDVQGDRPRPLPVIKELKNAIDITERKGSPSWDYEDEKSCWMWKKPPPASKKRVADSVGP
EDGKVIRIIKRQKANISVREKLLKEFSCQICRKVMANPITTPCAHNFCKACLEGAFAGQS
LTRQRGQGRRTLRAQKNVMKCPSCTIDIADFLQNPQVNRELMGVIESLQQQAEQEKLDNN
SEECSEESDATEQQRDLVADDQIAEEPKDESQNAQKQKKETDDDDIMDPSSNVQTMSPGK
EQEAPTTTDRASQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaactcccgtgcgacggagccggcatttgcatggtctgcaaaaacaagccaccaagt
gaagagaccctcgcgtgcaaaacatgtgtcaccccctggcacgccacgtgtctcgtctcc
ccccctcaggcgctatctgatacgctgcaatgggagtgccctgactgctccatgattcat
ccgccgtccacctccgccttcgcctccggaagatcggaggattccggtgatctcatcgcg
tcgattcggaagatcgaggatgacaaatcgttgactgaacaggagaaggcaaagaaacgt
caggagctgttgagtggcgccgccgctggtccgtcctcattggacggcgaggaaaagaaa
gagaagaatgacgtccttgatatactcgataaggagttgacttgctctttctgcatgcaa
atgcttgatagaccggttacaactccatgcggtcataacttttgcttgaagtgcttccag
agatggattggacaagggaaacgtacatgtgcatattgccgtgtacaaatcccacccaag
atagcaagccagcctcgtatcaattctacacttgttattgccatacgtatggcaaggatg
tcaagatccagcaatgctgggggtgctgcgaaggtatatcattttgtccacaaccaaaac
aggccagacaaagcatacacaacagagcgggcaaagaaagctggcaaggctaatgcttgt
agtgggaagatctttgtcacagttgctcctgatcactttgggccaatccctgcagagaac
gacccagaaagaaatatgggtgttttggtgggagagatatgggaggataggctggcatgc
aggcaatggggtgcccatctcccccatgttgcaggaattgctggtcagtctacttatggc
gcgcaatcggtggctctttctggaggttatattgatgacgaggaccatggtgaatggttt
ctttacactgggagtggaggaagggacctgagcggcaataaacgcacaaacaaggaccag
tcctttgaccaaaagtttgacaagatgaacgaggcactacgattaagctgcctaaagggc
tatcctgtaagagtggttaggtctcacaaagagaagcgatcatcatatgctccagaaaca
ggtgtgcgttatgatggggtttatagaattgagaagtgttggcgtaagaatggaatacag
ggctttaaagtttgcaggtatctctttgtcagatgcgacaacgagcctgctccatggacg
agtgatgttcaaggggaccgtccgaggcctctgcctgtcatcaaggaattaaagaatgca
attgatataactgaaaggaaggggtccccttcctgggactatgaggatgaaaaaagttgc
tggatgtggaaaaagccacctccagccagtaaaaaaagagttgctgatagtgtaggtcca
gaagatggcaaagtgattaggataatcaagcgacaaaaagcaaatatatctgttagagaa
aaacttctgaaagagtttagttgtcaaatttgccggaaggtgatggccaatccaatcact
accccatgtgcccataatttctgcaaagcatgtcttgagggtgcctttgctggccaaagt
ctcactagacaaagaggtcaaggaagacggacattaagagcgcaaaagaatgttatgaaa
tgtccatcatgtactattgacatagctgactttcttcagaacccacaggtgaatcgggag
ttgatgggtgtcatagaatcactacaacaacaagctgagcaggaaaaactggacaacaat
tcagaagagtgtagtgaagagagtgatgccactgagcaacaacgagatttggttgctgat
gaccaaattgccgaagagccaaaggatgaatcccaaaatgcacagaagcagaaaaaagaa
actgatgatgatgacattatggatccatcatcaaatgtgcagacaatgagtccagggaag
gagcaagaagccccaaccactactgatagagccagtcaataa
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