Populus trichocarpa (black cottonwood): 7496623
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Entry
7496623 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7496623
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7496623
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At1g61320_AtMIF1
LRR_14
LRR_4
LRR_At5g56370
F-box_5
F-box-like
LRR_R13L1-DRL21
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
7496623
NCBI-ProteinID:
XP_002323765
UniProt:
B9IJF9
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All DBs
Position
17:4021486..4023999
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AA seq
467 aa
AA seq
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MDDLPDQLVWDILSRVKKTVDKNSASLACKRIYELDNEQRQSMRVGCGLDPANQALTSLC
NRFPNLAKVEITYSGWMSKLGKQLDDQGLVILANNCPSLTDLTLSYCTFITDVGLRHLAS
CSKLSALKLNFTPRITGCGILSLVVGCKNLTILHLIRCLNVTSVEWLEYIGKLETLEDLS
IKNCRALGEGDLIKLGSSWRKLKRLQFEVDANYRYMKVYDRLAVDRWQKQWIPCESMLEL
SLVNCIISPGRGLACMLGKCKNLEKIHLDMCVGVRDCDIIGLAKKSSNLRSISLRVPSDF
SLPLLMNNPLRLTDESLKALAQNCSMLESVRISFSDGEFPSFSSFTQNGILNLIQMCPIR
ELALDHVYSFNDVGMEALCSAHYLETLELVRCQEISDEGLQLVGQFPRLCILRLKKCLGV
TDDGLYPLAGTDKLDFLAVEDCPQISERGVQGAARSVSFRQDLSWMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttgccagaccaattggtgtgggatatcttgagcagggtcaagaaaactgta
gataaaaactctgcttcacttgcatgtaaacgtatctacgaactggataatgaacaaaga
caatctatgagggttggttgtggactagaccctgcaaatcaagccctgacatcgctctgc
aataggtttcctaacttggcaaaagtagaaataacatattctggttggatgtctaagttg
ggaaagcaattagatgaccaagggcttgtcattcttgccaataattgtccttctctgact
gatctgacactgagctactgtacattcataactgatgtaggtcttcggcacttggcttct
tgttccaagctttctgccttgaagttgaatttcactccaagaatcactggttgtggcatt
ttatctcttgttgtgggctgcaagaatcttacaattcttcaccttattcgatgtcttaat
gttaccagcgttgaatggcttgaatacattggaaagcttgaaacactggaagacctttca
attaagaattgcagagcacttggtgagggtgatttgattaagctaggatctagctggcga
aaactaaaaaggttgcagtttgaggtggatgctaattacagatatatgaaggtttatgat
aggctagctgttgatcgatggcaaaaacagtggatcccgtgtgagtccatgttggagctt
agcctggtgaattgtatcatcagtcctgggagagggcttgcttgtatgttggggaagtgc
aagaacctggagaagattcatttggacatgtgtgttggagtcagagattgtgacatcata
ggcttagctaaaaaatcaagtaaccttcgctcaatttcactccgagttccttctgatttc
tctctgccacttctgatgaacaatccactgagattaacagatgagagtcttaaagcccta
gctcagaactgttcaatgcttgaatctgtccggatatctttttctgatggggaatttcct
tccttttcatcatttacacaaaacggaatccttaatttgattcagatgtgcccaattcgg
gaacttgctcttgaccatgtgtattccttcaatgacgttggtatggaagctctttgttca
gctcactatcttgaaaccttagagcttgtcagatgccaagaaatcagtgacgaggggcta
cagcttgtggggcagtttcctcgtctgtgcattttacgattaaaaaaatgtttaggggtt
actgatgatggattgtaccctcttgctgggacagacaaattggatttcttagctgttgaa
gattgccctcaaatttctgaaaggggcgttcaaggagctgcaagatccgtgtcattccgg
caagacttatcatggatgtattga
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