Populus trichocarpa (black cottonwood): 7496626
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Entry
7496626 CDS
T01077
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 homolog A
KO
K03032
26S proteasome regulatory subunit N2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7496626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7496626
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7496626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
Motif
Other DBs
NCBI-GeneID:
7496626
NCBI-ProteinID:
XP_002323770
UniProt:
B9IJG7
LinkDB
All DBs
Position
17:4165813..4172383
Genome browser
AA seq
1006 aa
AA seq
DB search
MPETMVSSAGGLLAMLNESHPLLKQHALYNLNNFVDQFWPEISTSVPIIESLYEDDEFDL
HQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASLKSK
AAESNSDGADVDPRLEAIVERLLDKCIMDGKYQQAMGIAIECRRLDKLEEAIMKSDNVHG
TLSYCINVSHSFVNRREYRLEVLQLLVNVYQKLPSPDYLSICQCLMFLDEPEGVASILEK
LLRSGNKDEALLAFQIAFDLVENEHQAFLLNVRNRLPPPKSQISEPEQPKSLVPDSSQNE
NSSAPEDVQMTEGTSSSTVHEPDPSEVVYAERLTKIKGILSGEMSIQLTLQFLYSHNKSD
LLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAG
LGVIHRGHLQQGRSLMAPYLPQGGAGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRE
SIRSTSVEVIQHGACLGLGLAALGTADEDIYDDFKSALYTDSAVAGEAAGISMGLLMVGT
ASEKASEMLAYAHDTQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPILRYGGMY
ALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESY
NPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQMNEASDS
RVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVVGLA
VFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFISNAKPSLFEYPKPTTVPTMAS
AVKLPTAVLSTSVKAKARAKKEAEQKASLEKAAGAESSPAATTAGKGKASNEKDGDAMQV
DGQPEKKAEPEPSHEILTNPARVVPTQEKFIKFMEDSRYVPVKSAPSGFVLLRDLQPTEP
EVLSLTDTPSSTASPASGSATGQQGSASAMAVDEEPQPPQPFEYTS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaactatggttagctctgcgggtggactgctggctatgcttaatgagagccac
cctttgttaaaacaacacgctctctacaatctcaataactttgtcgatcaattttggccg
gagatctctactagcgtgcctataatagagagcttgtatgaagatgatgagtttgatctg
catcagaggcaacttgccgcattgcttgtttctaaggttttctattacttgggtgaactt
aatgactcactgtcgtatgcccttggagctggatccctctttgatgtttcagaggattct
gactatgttcatactcttcttgctaaggctattgatgagtatgctagcctaaagtccaag
gcagctgaatcaaattctgatggagctgatgtggaccctaggctggaagcaattgtggag
agattgctagacaagtgcatcatggatggaaagtaccagcaagctatgggaattgcaatt
gaatgccgaagattagataaacttgaggaagctatcatgaagagtgataatgtccatgga
actctgtcctattgtattaatgtttcccattcattcgttaatcgcagagagtatcggctt
gaggtcctccagcttcttgttaatgtatatcaaaagctgccttctcctgattatttgagc
atttgtcagtgtttgatgttcttggatgagcctgaaggtgtagctagcatattggaaaaa
cttctacgctcaggaaacaaggatgaagctctgttggcatttcaaatagcttttgatctt
gtggagaatgagcatcaggcttttcttttaaatgttagaaaccgccttccacctccaaag
tctcaaatttcagagccagaacagccaaaatccttggttccagattcatctcaaaatgaa
aattctagtgctccagaagatgttcaaatgacagaaggaacctcatcttctaccgtgcat
gaaccagatccaagtgaagtagtgtatgctgagaggctgacaaaaatcaagggaattttg
tcaggagagatgtcaatacagctgactttgcaattcctatacagtcataataagtccgac
ctccttatattgaagacaatcaagcagtctgttgagatgagaaacagtgtctgtcatagt
gcaactatttatgctaatgcaattatgcatgctggaacaactgtggatacatttctcaga
gaaaatctagactggttaagcagggcgacaaattgggccaaatttagtgcaacagcaggt
cttggtgtcatccacagaggtcacttgcagcagggcaggtcactgatggccccttacttg
cctcaaggtggtgctggtgctggtggtggaggtagtccatactcagaaggtggcgctctc
tatgctttgggactcattcatgccaaccatggcgagggcataaaacaattccttcgtgaa
agcatacgtagcaccagtgtggaggttattcaacatggtgcatgcttaggtcttggtttg
gcagctctgggaaccgctgatgaagatatctatgacgacttcaaaagtgcattatatact
gatagcgctgttgctggtgaagctgctggtatcagcatgggcttgctcatggttgggact
gcaagcgaaaaagctagtgagatgcttgcatatgcgcatgatacacaacatgagaaaatc
atcaggggattagcattgggaatagcccttacagtttatggaagagaagaagaagcagac
acgctaatcgagcagatgacacgggatcaagatcctatacttcgttatggtggcatgtat
gcattggcattggcctacagtggtacagcaaacaacaaggccattcgccagttgctgcac
tttgctgtatcagatgtgagtgatgatgtcaggaggactgctgttcttgcacttggattt
gtcttgtactctgagccagagcagactcctcgaattgtctccttgctttcagagtcatat
aacccacatgtacgatatggtgcggctcttgcagttggcatctcctgtgcaggcactggc
ttgagtgaggctatatcattgctagaacctttgacgtcagatgttgttgattttgttcgt
caaggtgccctgattgcaatggctatggtcatggtccagatgaatgaagccagtgattct
cgtgttggaacattcagacggcaattggaaaaaataattcttgacaagcatgaagacaca
atgagcaagatgggagcaatccttgcttctggaatacttgatgctggtggtaggaatgtg
actataagattgctttccaagacaaagcatgataaaatcactgctgttgttggccttgct
gtttttagccagttttggtactggtatcctcttatctatttcataagcctggcattctca
cccacagcttttattggactcaactatgacttgaaagttccaaaatttgagtttatatca
aatgcaaagccttctctgtttgagtatccaaaacctactaccgtgcctaccatggcgtct
gctgtcaaacttcctactgcagttctgtcaacatcagtgaaggccaaagctagggccaag
aaagaagcagagcagaaagctagtttagaaaaggcggcaggagctgagtcttcacctgca
gcaacaactgctggaaaaggaaaagcatctaatgagaaggatggggatgctatgcaggtt
gatgggcaaccagagaagaaagcagagcccgagccttctcatgagattttgacaaaccca
gccagggttgttcctacccaggagaaatttattaaatttatggaggatagcagatatgtg
ccggtgaagtcagcaccttcagggtttgttctcttgagagacctgcaaccaactgagccc
gaagtgctttctcttacagatacaccttcatctacagcatcacccgctagcggttcagcc
acaggacagcaaggttcagcatcagccatggcagttgatgaggaaccccagcctccacag
ccttttgagtacacctcgtaa
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