Populus trichocarpa (black cottonwood): 7496642
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Entry
7496642 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7496642
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7496642
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GFIT
Motif
Pfam:
LRR_6
LRR_SKP2
LRR_RPS2
LRR_R13L1-DRL21
F-box-like
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
7496642
NCBI-ProteinID:
XP_002323795
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Position
17:7507032..7509091
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AA seq
484 aa
AA seq
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MDDMLCDELLQEIFTRIPKSLPPPPSSASAASVSLVSKRWLHLYRTSKTSLSLRLNPDDS
TISSLTSVLSHYPFLSSLSLFLLSSDPTVPATITSPPAFYDRLLFIVSAFCSSLKHLRFL
AGPVSQSSLFSLSNSCTFLNSLTISLYRPLYFNWVVSFSCLKELSVYVSGFYGVDDCNRE
SGFCINEELDAELGLESLFLSGIGGEDYGVGWLWRSSKRLKKLKLKSCEGIGDGGSFLSF
AKCLKGLQEVEIRACRSIVNGVLLKLAENCDSLYSLLVYDGGNREGLHHFISSCRCDLQK
LDFRLPLDLRNDHLSAIGLNFRGLSTLRLQSCCLVSGEGLKALGIALNSGLEELALINCD
VVERESGLLATLGQHTRQLKKLDLSYNEFLLDKEFISMLVSCNCLIELNLRRCAGLTTVS
MVSMFKNCRKLQSVDIMHCDGIGAEAVELFVLNSPQLRGLQVEENKVSDVARSWASHKLI
QIVS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatgctatgcgatgagctgcttcaagaaatatttacaagaataccgaaatca
ttaccaccaccaccgtcatcagcttcagcagcatcggtatccttggtctctaagcggtgg
ctccacctctaccggacctcaaaaacctctctttctctcagacttaaccctgatgattcc
acaatttcctctctgacttctgtcctctctcactacccttttctctcttctctatctctc
ttccttctctcctctgaccccacagtacctgctaccataacttcccctccagctttctat
gatcgtcttctctttatagtctccgctttttgctccagtcttaaacacctcaggttcttg
gctggtcctgtctcacaatcttctctcttctctctctctaattcttgcacctttttgaac
tctctcactatctctctctataggcctctctattttaactgggttgtttccttttcttgc
ttaaaggagctgtccgtctatgtatctggcttttatggagttgatgattgcaatagagaa
tctggcttctgtataaatgaagagcttgacgctgaattgggcttagagagtctttttttg
tcggggattggaggagaagattatggtgttggttggttgtggaggagcagcaaaaggctc
aagaaattgaagctaaagagctgcgaaggtattggtgatggagggtcctttttgtcattt
gctaagtgcttgaagggtctccaagaagtggagataagggcttgtcggagtatagttaat
ggggttttgttaaaattggcagagaattgtgattccttgtattctctattggtttatgat
ggtggtaatagagagggcttacatcacttcattagcagctgcaggtgtgatttgcaaaaa
ctcgatttccgattacctttggacctgaggaatgatcatctctcagctatcggactgaat
tttaggggtctctcaactcttaggctccaaagttgttgtctggtgagtggtgaagggctc
aaggctcttgggatagcattgaattcaggccttgaagaactggcattgattaactgtgat
gttgttgaaagggaatccggattgcttgccacattaggacagcatacaaggcaattaaag
aaactggacttgtcttataatgagtttttgctcgataaggagttcatctccatgctagtt
tcttgtaattgtttgattgaattgaatttaaggcggtgtgcaggacttaccacggtgtcg
atggtttctatgtttaagaactgcaggaaattgcagagtgttgatatcatgcattgtgat
gggattggagctgaggctgttgagttatttgtcctcaattcaccacaattgagaggtctt
caagtggaggaaaacaaggtttcagatgttgcaaggtcatgggcatcgcataaactcatt
cagattgtttcttaa
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