Populus trichocarpa (black cottonwood): 7496657
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Entry
7496657 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 9
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7496657
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
7496657
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
7496657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
MBD
WSD
FYRN
PHD_2
FYRC
PHD-1st_NSD
Phage_zn_bind_3
DUF7028
Bromodomain
zf-PHD-like
DDT
PHDvar_NSD
KIAA2026_hel
C1_2
Motif
Other DBs
NCBI-GeneID:
7496657
NCBI-ProteinID:
XP_002324010
UniProt:
B9IJM9
LinkDB
All DBs
Position
17:complement(7927056..7944040)
Genome browser
AA seq
2184 aa
AA seq
DB search
MKLTTDSSDITSRSPLGIDLNEIPSTSTSSPPENSLDVVLSFHENPDPAPGMAAGLRAEG
SMCGACGKPEVRGQVVVCDGCERGFHLGCAGRQAINSAEWLCGECLSGGVKSKRWPLGVK
RILDINASPPSDAEDELLSNLRKHTQSQGDNSFGAPPLTYSNLFYTGYGLLSDVMRPMQT
ADTSAEGAGMSFPQGSLRSRNNTTIRLLSRNPSEIFLQGLREFISERHGVLEEGWSVEFK
HSISNYDLYAVYCSPDGKTFHSMSEVACHLGLMPNRNSIDTDSTSYVSPSPQETLHLPRK
SKSKRCSLTNVFSEHKTTLVSGYCKELFSNGQSIEINNANLGEVRESEMQGDGISDFQPS
NEGLPVQFEDFFVLSLGKIDVRPTYHNASLIWPVGYRSCWHDKITGSIFLCEVSDGGDSG
PVFKVRRVSCSLLPVPQGLTVLCRTNFGQYSSHNNQDCHHMIFHNIDCESDDNIELILAD
PAPPSYDDVLTCLQGSSNRTSEIMQTSSFDSRSENFLFSDKVLGEEIGEISVEERSSTSA
WTVISQKLVDAYSEIHRQRGTLKVSCNHADNEMGSPGLYTKNENSNASSASLAKFCSCPN
FVGIPLECQGELEAFSSTLSEWLDQDRFGLDTEFVQEMIEQLPGAKACLKYEFLINRGHY
SVSPTVGNGFLMAKRKSRSESDALFQRSKKARLAKEILGDYQYPAGRPLCSRLPPVLVGD
FYQVLELLWRFHEILGLKEPLSLEELEEELINPWSNLSHLLKNLENKVHGSEAIDFYEAD
SMSGLNSFLPDKSGMTVCEGNSHACVNDEGCRMGVKDGGQATVASVTHISRSGVASTNAH
CSLLGMLISELQCKIAPLVDPNFDSGETKSKRGRRKDADSSAPTRRNNLNMLPINELTWP
ELARRYILAVLTMDGNLESAEITGREMGRVFRCIQGDGGVLCGALTGVAGMEADALFLAE
AXKKVFGSLSRKKDFLSIEDETADTSCDHENNNMKDGNIPEWAQVLEPVRKLPTNVGARI
RKCVYDALEKCPPEWAKTRLEHSISKEVYKGNASGPTKKAVLSVLADVLTGVQQKAVKTN
KKKISIPISDIIMKQCRIVLREAAAADDAKVFCTLLGRNLRNSCDTDDEGLLGSPAMVSR
PLDFRTIDLRLAAGAYGGSHESFLEDVRELWSHVRMAFREQGDLVELAETLSQNFESLFE
KEVVTLVKKFEGYAKLDHISAEIKKELDDFLASIHEVPKAPWDEGVCKVCGVDKDDNSVL
LCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVVSKHVVQEASGISQVIGIVHCKKYQGEI
THVYLEKLSHLSVTMKEKEYWEFSVDERIYLLKFLCDELLNSGLIRQNLEQCAETTNELQ
QKLRAFSMEWKTMKSKEEFLASRAADMDGSAVGEVGLKEALASAIPNQPKQAGQQPDVSD
GPSHCSSFGHDVPALNGGQDGTRINGFDKYPSVSSSGKNHSCNSQTVNHTDTKEQVNDPL
AVVDGSKLPSRENEKSSGPNNLSQIIGDMDEIQFQGNLQGYAGRGTSLLPPPDVGFGTAL
EENSRVSQHVPPVAINESEGFNLELSAVKNDLLHLQNSISRIQSQLLKLSVRREFLGSDS
RGRLYWASTGRGSDQRVIVDGSLTLQQRNSDQFGTRLNLEEQKTFFPFQCTSNNVLAMCS
PCVSYETEEEIEQLISWLKDDVQKERELKESISQCLKQRFQETRQARDLVQEEHQALSVI
TNNNNTAFANYLVTKAAMFLEKKYGPLVELHTSDKLVKRARVTGEGKMYRCDCLEPILPS
RHHCLSCHRTFSDDIEFNEHNGGRCNLITPANAKSEYISGFVKVKGNMKSQTTQKVPISE
MDVVETSRSGSSGLGSRLIKSQNEGICPYDFSEISSKFVTEDSNKELVHKIGLIGSNGVP
SFITSLSSDLNHSMSMLICHGENNGVVGDELSIDGRMVVSKGKKSESSAALDNIYDNSSW
KSVANEISKVSKTEKPPPGHVEHRKKKSSSNKHFPEIGAGFCCVVPRSSLRPLAGNVLHI
LRRLKINLLDMEAALPEEALKPSKVHLDRRLAWRVYVKSAGSIYEMIQATIILEEMIKTD
YLRNEWWYWSSFSAAAKTSTIASLALRIYSLDAVIVYEKATPNLDSTNSLKPVGMLDKKP
LPGLDLTDKSKVSRKSNKKRKEPE
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacaaccgattcaagcgatataacgagtcgctcccctctaggcatcgatctc
aatgagatcccctccacttcgacctcttctcctccagaaaattcattggatgtggtgctg
tcctttcacgagaacccagacccggcgccgggaatggctgctgggttgcgggccgaggga
tcgatgtgcggggcatgcggaaagccggaggtgcggggtcaagtggttgtttgtgacggt
tgcgagcgtggtttccacctaggttgcgctggaaggcaagctattaattcggcggaatgg
ctatgtggagagtgccttagtggcggcgttaagagcaaacgttggccattaggtgttaaa
cggattttggacatcaacgcttcgccaccaagcgatgccgaggatgaattgctttcaaat
ttgaggaagcacactcagagtcagggtgataattcttttggtgccccccctctcacatat
tcaaatcttttctacaccgggtatggattattgtcagacgtaatgcgtcctatgcaaact
gcagatacaagtgctgagggtgcagggatgagtttccctcaaggaagccttagaagcagg
aataatacaaccattagattattgtctcgcaatcctagtgagattttcttgcagggtctc
agagaattcatttctgaaaggcatggtgttctggaagaaggttggagtgtcgaatttaaa
cattctatcagtaattatgacctctatgcagtttattgctctccagatggaaagactttt
cactcgatgtctgaggttgcttgccatcttggcctgatgcctaatcgtaattcaatcgac
acggactcaacaagttacgtgtctccctctccgcaggaaactttgcatctacccagaaag
agcaagtccaaaagatgttcacttaccaatgttttttctgaacataaaacaactttggtg
agcggctactgcaaggagcttttttccaatggtcaaagtattgaaattaacaacgctaac
cttggtgaagttagagaatctgagatgcaaggagatggcatatctgatttccagccatct
aatgaaggacttcctgtccagtttgaagacttctttgttctttctttgggaaaaatcgat
gtgagacctacatatcataatgctagcctgatttggcctgtaggttatagatcctgttgg
catgataagattactggatccatttttttgtgtgaagtgtcagatggcggtgattctgga
cctgttttcaaggttaggagggtctcatgctcattgttgcctgttcctcaggggctaact
gttctatgtaggacaaactttggccagtatagtagtcacaataaccaagattgtcatcat
atgattttccacaatatcgattgcgaaagtgatgacaatattgagttgattcttgcagac
cctgccccgccatcatatgatgatgttctaacctgtcttcagggcagttcaaatagaaca
tcggagattatgcaaactagctcctttgatagcaggtctgaaaactttttgttcagtgat
aaagtattaggagaggagattggtgagatttcagtggaagagcgttcctcaacttcagca
tggacagtgatatctcagaaattagtggatgcttactctgaaatacatagacagcgaggt
actcttaaggtctcctgcaaccatgcagataatgaaatgggttcaccaggcttgtatacc
aagaatgaaaatagcaatgcaagttctgcctcattagccaaattttgcagctgtcccaac
tttgttggaatcccattggaatgccagggtgaacttgaggctttctcttctacattatca
gaatggctggatcaggatagatttgggttggacacagaatttgttcaagaaatgatagaa
cagctccctggtgcaaaagcctgtttgaagtatgaatttctgattaataggggtcattat
tctgtgtctccaactgttggaaatggattcttaatggctaaaagaaaaagtagatcagaa
tcagatgctttatttcaaagatccaaaaaagccaggttggctaaagagattttgggggat
tatcaatatcctgctgggaggcctttgtgttccaggctccctcctgtacttgttggtgac
ttttatcaggtattggagttattgtggcgcttccatgaaatattgggtttgaaagagcct
ctttccttagaggaacttgaagaagaacttatcaatccatggtctaatctttctcatctt
ctaaagaatcttgagaacaaggtccatggtagtgaagccatagatttttatgaagcagat
agtatgagtggactaaactcatttttacctgataaatctggcatgacagtttgtgagggt
aattcacatgcatgtgttaatgatgaaggatgtaggatgggagtgaaggatggaggccaa
gctacagttgcatctgttacccacatcagtcgcagtggtgtagcttcgactaatgcacat
tgctcgttgttaggtatgctaataagtgagctacaatgcaagattgctccactagtagat
ccaaattttgattctggggagacaaaatcaaaacggggaaggaggaaagacgcagatagc
tcagctccaacaagaagaaataacctcaatatgctccctattaatgaattgacttggcca
gaattagccaggagatacatcttagcagtcttaactatggatggtaatcttgaatctgct
gagattactggtcgtgaaatgggcagagtgtttcgctgcatacaaggtgatggtggggtg
ctttgtggcgctcttactggagttgcaggcatggaagcagatgcactttttcttgcagag
gctnacaaaaaagtttttggttctttgagcagaaaaaaggattttcttagcatagaggat
gaaacagctgatacaagttgtgatcatgaaaataataacatgaaagatggtaacatccca
gagtgggcacaggtgctggaacctgttagaaagctacccactaatgtaggagctagaatc
agaaagtgtgtttacgatgctctggagaaatgtccaccagaatgggcaaaaacaagattg
gaacattcaattagtaaggaagtgtacaagggcaatgcatcaggacctacaaagaaagct
gtgctttcagtgctagcagatgtattaactggagtccagcaaaaagcggtcaagacaaat
aaaaagaaaatatctatacctatttctgacattataatgaaacaatgtcgtattgtattg
cgggaagctgctgccgcggatgatgcaaaggttttttgcaccttgctgggaagaaatctc
agaaattcttgcgacactgatgatgaggggcttcttggatctccagctatggtttctcgt
cctctggattttaggactattgatttgagattagcagctggagcctatggtggttcacat
gaatcttttcttgaagatgttcgagagttatggagccatgtacgcatggcattcagggaa
cagggtgatttggttgaattagccgagacactttcccaaaactttgaatcattgtttgaa
aaggaggtggtcacccttgttaagaaatttgagggttatgctaaattggatcacataagt
gcagaaataaagaaagaattagatgattttcttgcttcaatacacgaggttccaaaagct
ccttgggatgaaggggtctgcaaagtatgtggtgttgataaagatgataacagtgtgctg
ttatgtgatacttgtgatgccgagtatcatacttattgcttgaatcctccacttgcaagg
attcctgaagggaactggtattgtccatcttgtgttgtcagcaaacatgtggttcaggag
gcatcaggaatttcacaggttattgggatagtccactgtaaaaagtatcagggagaaatt
acccatgtttacttggagaaactctcacatttatccgttacaatgaaagaaaaagagtat
tgggagtttagtgttgatgagagaatctacttgctaaagtttctatgtgatgagctgcta
aactcaggtcttattcgtcaaaaccttgaacagtgcgcagaaacaacaaatgagttgcag
cagaaattgcgtgcattctctatggaatggaaaaccatgaaatcaaaagaagaatttttg
gcttccagagctgcagatatggatggtagtgcagttggtgaagttggtttaaaggaagcc
cttgcttctgcaattccaaaccagcccaagcaggcgggacaacaacctgatgtgagtgat
ggacctagccactgtagctcctttggtcatgatgtgccagcactaaatggtggccaagat
gggactaggattaatggattcgataaatacccttctgtatcaagttctgggaaaaaccat
agttgtaacagccaaactgtgaatcatacagatactaaagagcaagtaaatgatcccctt
gctgttgtggatggcagtaaattaccttctcgagaaaatgaaaaatcatccggaccaaat
aatttgtctcaaataattggtgacatggatgaaattcaattccagggtaacctgcaagga
tatgctggaagaggcacttctcttctgccaccaccagatgtaggattcggcaccgcatta
gaagagaacagtcgcgtgagtcagcatgtgcctcctgttgctatcaatgaatcagaaggc
ttcaatcttgagttgagtgccgttaagaatgatcttcttcatctgcagaactcaattagc
aggatacaatcacaacttttgaaactatctgtgcggagggagttcttgggttccgattcc
agaggtcgcttgtactgggcttcaactggacgaggtagtgatcaacgagttattgttgat
ggaagtttgacattgcagcaaaggaattcagatcagtttggcactcgtttaaatctggaa
gagcaaaaaactttctttccattccaatgtacttcaaataatgttctggctatgtgctcg
ccatgtgtttcttatgaaactgaggaggaaattgaacaactcattagttggttgaaggat
gatgtacaaaaggaacgagagctgaaagagtccatttcacagtgtctgaagcaaagattt
caagagactcgacaagctagagacttggttcaagaagagcatcaagctttgtcagtgatc
acaaacaacaacaacactgcatttgctaattatcttgttaccaaggctgcgatgtttctg
gagaagaagtatggtcccttggtggagttacacaccagtgacaagctggtcaaaagggca
agagtgactggcgaggggaaaatgtaccgttgtgattgcttagagcccattttaccttcc
agacaccactgcctctcttgccaccgaactttctctgatgatattgaattcaatgagcat
aatggcggtaggtgcaatttaattacaccagccaatgcaaagagtgaatatatcagtggt
tttgtaaaagtaaaggggaatatgaaatcccagaccacccaaaaggtacctatcagtgaa
atggacgtggttgaaacttctagaagtggttcctctgggcttgggtcgaggttaattaaa
tctcaaaatgaagggatatgcccctatgacttcagtgaaatcagttccaagtttgtgaca
gaagattccaacaaggaattggtacataaaataggtcttattggttcaaatggggttcct
tcatttatcacatctctttcatctgatctcaatcattccatgtcaatgctgatttgtcat
ggagaaaataatggtgttgttggtgatgagttgagtattgatggaaggatggttgtttca
aaaggaaaaaagagcgaaagcagtgcagcccttgataatatttatgataattcttcatgg
aaatctgttgcaaatgaaattagcaaagtatcaaaaaccgagaagccgcctccaggacat
gtggaacatagaaaaaagaaatcttcttcaaataaacattttcctgaaataggggctggt
ttctgctgtgtagttcctcggtcatccttgaggcccttagctggaaacgttttgcatatt
ttaaggcgactaaagatcaatttgcttgatatggaagcggcccttcctgaagaagcactt
aaaccctcaaaagtgcatttggatagaagattggcttggcgtgtgtatgttaaatctgca
ggatcaatctatgagatgatccaagcaacaattatattggaggagatgattaagacagat
tatttgcggaatgagtggtggtactggtcatcgttttctgctgctgccaagacttcgaca
attgcttccctagctctacgaatatattcccttgatgctgtgattgtgtacgagaaggcc
acgccgaacttagattcaaccaacagtttgaagcctgtgggtatgctggataagaagcca
ttgcctggtttggatctaacagacaaaagcaaagtaagcaggaagtctaacaagaaaagg
aaggaaccagaatga
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integrated database retrieval system
