Populus trichocarpa (black cottonwood): 7496669
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Entry
7496669 CDS
T01077
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00071
Fatty acid degradation
pop00280
Valine, leucine and isoleucine degradation
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01212
Fatty acid metabolism
Module
pop_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pop_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
7496669
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
7496669
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
7496669
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Paralog
Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Choline_kinase
Motif
Other DBs
NCBI-GeneID:
7496669
NCBI-ProteinID:
XP_002314363
UniProt:
B9HXR1
LinkDB
All DBs
Position
10:1883872..1890424
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AA seq
823 aa
AA seq
DB search
MANRTYDLLGQVQAGHQFDHDSLFRYASVHVPGFPSSAASTFTVKQFGHGQSNPTFLLEV
GNGGSVKRYVLRKKPPGKLLQSAHAVDREYQVLRALGEHTEVPVPKVFCGCMDASVIGTD
FYIMEFLEGRIFMDPKLPGLAPERREAIYRETAKVLAALHSVDVDAIGLGKYGRRDNYCK
RQVERWTKQYIASTGDSRYPSNPKMLELARWLQQHIPSEDSSGEGIVHGDFRIDNVVFHP
IEDRVIGILDWELSTLGNQMTDVAYSCLAYIVDINHENQQVGKGFELTRIPEGIPSQAEY
LAGYCSASGKSWPAAVWKFYISLAMFRGAAILAGIYSRWLMGNASGGERAQNAGKQANDL
VDSAWAYIARKSVLPNHPPPDPIARDYMKQQFGGGNESGRFVPSVKVLKLRNKLIKFMED
HIYPMENEFYKLAQSSSRWTVHPEEESLKELAKKEGLWNLWISFDSAERAKKLLFDESSR
MVSNGEHDQFLGAGLSNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLL
EWLVPLLQGKIRSGFAMTEPQVASSDATNIECSIKREGDSYIINGRKWWTSGAMDPRCKV
LIVMGKTDFTAANHKQQSMILVDIQTPGVHIKRPLMVFGFDDAPHGHAEVVFDNVRVPAK
NILLGEGRGFEIAQGRLGPGRLHHCMRLIGASERGMQMMVQRALSRKAFGKLIAEHGSFR
SDVAKCRIELEKTRLLVLEAADQLDRFGNKKARGTIAMAKVAAPNMALMVLDTAMQVHGA
AGVSSDTVLAHLWATSRTLRIADGPDEVHLGTIAKLELRRAKL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacgtatgatttgttagggcaagttcaagcaggtcaccaattcgatcac
gactccttattccgctatgcctctgtccatgtccctggcttcccttcctctgcagcttca
accttcaccgtcaaacagtttggacatggacaatcgaatccgacgtttttattggaagtg
ggaaatggaggttccgtgaaacgctacgtattgaggaagaaaccgcctggtaaattgctt
cagtctgcccatgctgtggatagagaatatcaggttcttcgggcgcttggtgaacatact
gaagttccagttcccaaagtgttttgtgggtgtatggatgcgagtgtgattggaactgat
ttttacatcatggagtttttggaaggacgcattttcatggatcctaagcttccgggtttg
gcgccggagaggagggaggcaatctatagagaaactgccaaagtattggctgctttacat
tctgttgatgtggatgctattggtttaggaaaatatggacggcgagataactattgtaaa
agacaggtagagagatggaccaaacaatacattgcatcaactggtgatagtaggtatccg
agtaatccaaagatgttagagctggctcgttggttgcagcaacatattcctagtgaagat
tcctcaggagaaggaatagttcatggggactttcgcattgataatgttgtatttcatccc
attgaggatcgagtaattggtattctcgactgggaattatccacattaggaaaccagatg
actgatgttgcgtacagctgtttggcttacattgtggatattaaccatgaaaatcaacaa
gtgggtaaaggctttgaacttaccagaattccagaaggaattccttcacaagcagaatat
ctggcaggatactgctctgcatctggaaaatcatggcctgctgctgtgtggaagttctat
atttccttggctatgtttcgtggggcagcaatccttgcagggatatacagtcgttggctt
atgggcaatgcctcaggaggtgagcgtgctcaaaatgcaggaaagcaagctaatgatctt
gtagactctgcatgggcgtatattgcaagaaaatctgtgctccctaatcaccctcctcct
gatccaattgctcgagattacatgaaacaacaatttggtggagggaatgaaagtgggagg
tttgttcctagtgtaaaggtcctaaagttgagaaacaagttaatcaagtttatggaagat
cacatttaccccatggaaaatgagttctataaacttgctcagtcttcttcacgttggaca
gtgcacccagaggaagagagtttaaaggagctggctaagaaagaaggattgtggaacttg
tggatatcttttgatagtgctgaaagagctaaaaaattactatttgatgaaagtagtcgc
atggtttctaatggtgagcatgatcagttccttggtgcgggcctctcaaaccttgaatat
ggatacctttgtgagatcatgggtcgttctgtttgggcaccgcaggtgttcaattgtggt
gcacccgacactggaaatatggaggtattgttgcgctatggcaataaagaacagctactc
gaatggctagttccattgcttcagggaaagatccgctctggatttgcaatgacagaacca
caagttgcatcatctgatgcaacaaatattgagtgttccattaaaagagaaggggattca
tacatcattaatggtaggaaatggtggacgagtggcgcaatggatccaaggtgtaaagtt
cttatagtcatgggaaaaacagacttcactgctgctaatcacaagcagcagtctatgata
ttagtagacattcagactccaggtgtgcacattaaaaggccactcatggtctttggcttc
gacgatgcacctcatggccatgctgaagttgtattcgacaatgtacgtgttcctgcaaag
aacattctactgggagaagggcgtggatttgagattgcacagggtagactgggccctgga
agattgcaccactgcatgagattgataggtgcttctgagcgtggcatgcagatgatggtt
caaagagctctcagcagaaaagcatttggaaaattaattgcagagcatggttcttttcgt
tcagatgttgcaaagtgtcgaatagagcttgagaagaccagactattggttcttgaggca
gctgatcagcttgatcggtttggaaacaaaaaagcccgtggtaccattgctatggccaag
gtagcagctccaaatatggcactcatggttcttgacacggcaatgcaagttcatggtgcg
gctggtgtatcatccgacacagttttggcccatctttgggcaacttcaagaacattgaga
attgcagatggccctgatgaagttcacttgggtaccattgccaagttagaattgcggaga
gctaagctttaa
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