Populus trichocarpa (black cottonwood): 7496793
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Entry
7496793 CDS
T01077
Name
(RefSeq) SAGA-associated factor 11
KO
K11363
SAGA-associated factor 11
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7496793
03036 Chromosome and associated proteins [BR:
pop03036
]
7496793
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
7496793
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
7496793
SLIK complex
7496793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
Motif
Other DBs
NCBI-GeneID:
7496793
NCBI-ProteinID:
XP_002299995
UniProt:
B9GGQ7
LinkDB
All DBs
Position
1:complement(29341968..29344061)
Genome browser
AA seq
178 aa
AA seq
DB search
MSVPNEDNMSPHMQLSSHFFGDLLDSIIVDVASECHRVARLGLDRNLEEEEEELRLSAQA
RVTVADPSNSGETNGKYVVDIFGQTHPCVANEVFDCMNCGRPIVAGRFAPHLEKCMGKGR
KARAKATRSSTAAQNRYSRGSPVSANSPYSNSTSTNRLLNGTYSHTVEEYSNGTCEGP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcccaacgaggataacatgtctcctcatatgcagctttcatcccattttttt
ggggatctcctcgattccattattgttgatgttgcctctgagtgtcatcgggtggcaaga
ctgggtcttgatcgcaatttggaggaagaggaagaagaattgaggttgtcagcacaagct
cgtgttacagtagctgatcctagtaatagtggtgaaaccaatggcaagtatgtggtagac
attttcggacaaactcatccatgtgttgcaaatgaagtttttgactgcatgaattgcggg
agaccaattgtggctggaagatttgctcctcatctggagaagtgcatgggaaagggtagg
aaggctcgtgccaaagccacaagaagtagcacagccgcacagaaccggtactcacgaggc
agtcctgtttccgcaaactccccttactcaaattccaccagcacaaacaggttattgaat
ggaacatacagtcacacagtcgaagagtactcaaatggaacatgtgaagggccctga
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