Populus trichocarpa (black cottonwood): 7496834
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Entry
7496834 CDS
T01077
Name
(RefSeq) transcription factor MYB118
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7496834
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7496834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SLIDE
SANT_DAMP1_like
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
7496834
NCBI-ProteinID:
XP_002300044
LinkDB
All DBs
Position
1:35887930..35890734
Genome browser
AA seq
445 aa
AA seq
DB search
MLIDEFPFLSSLLSEYNLNPEGTNDFSLEEALSSKGLFYNFHHLGYGHPTNITPPYLDLD
HFTIEGSSQNPFSGISGTCIDPARLDSLASGFSSHDLNAYTPTVVPLLPAGCGDRLLHGL
QRGSVRDHDYQKISGARSLNQKEMKEQRGFEEIGRTRTANNGVSTDEASCVSTEDSKHHK
QVDHHRKAKKLLLEKDSKVHKKSQVIKGQWTPQEDRLLVQSVKQYGIKKWSQIAKMLEGR
VGKQCRERWHNHLRPDIKKDAWSEEEDELLINAHREIGNRWAEIAKRLPGRTENTIKNHW
NATKRRQFSRRESGKDLDSKSTLLQSYIMMVTSSSSTQENNEEEKTDDVNSNSPNQNESP
GSSSTDLEIPYGHGHNNEASKLSFDTNLFNDSYGFMSFLEEMPCSCVVDESNMEFEISGL
DSLMKGAEVKKEMDLLEMITQGISH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctgatagatgaatttcctttcctttcaagccttctctctgaatacaacttgaatcca
gagggaactaatgacttttcccttgaagaggctctctcttccaagggccttttttacaat
tttcaccatcttggttatggccaccccaccaatatcactcccccctatcttgatcttgat
cattttaccattgaaggctcctcgcagaatccgttttctggaatttcaggaacatgcatc
gaccctgctcgccttgattcgttggcaagtggcttctctagtcatgatctcaatgcttat
acacccacagtagtacctttgttgcctgcaggttgtggagataggctattgcatggctta
caaagaggatcagttcgggatcatgattatcagaaaatatctggagctcgctccttgaat
caaaaggagatgaaggagcaacgcgggtttgaagaaatcggacggacgaggaccgctaac
aatggggtatccacagatgaggcctcatgtgtgagtactgaagattctaagcatcacaag
caagttgatcatcataggaaggccaagaagttactactggaaaaagactccaaagttcat
aagaaatctcaagttatcaaaggccaatggactcctcaagaagacagactattagtgcaa
tcggtgaagcagtatggaataaagaaatggtctcaaattgcaaagatgctggagggcaga
gtagggaagcagtgtagagagagatggcataaccatttgaggccagacatcaagaaagat
gcatggagtgaggaagaggatgagctactaatcaatgcccacagagagattggaaataga
tgggccgagattgccaagagattacctggaaggacagagaacaccataaagaatcactgg
aatgcgaccaagagaaggcaattttcaaggcgtgaatctgggaaggacctggattctaaa
agcaccctcttgcaaagctacattatgatggtgacttcatcttcatcaactcaagaaaat
aacgaggaagagaaaactgacgacgttaattccaattcacctaaccaaaacgagagccca
ggttcatcctcgacagatttggaaatcccatatggacatggccataacaacgaggcatcc
aagttgtcttttgacacaaacttgtttaatgatagttacgggtttatgtccttcctggaa
gagatgccttgcagctgcgtggttgatgagagcaatatggagtttgagatatcgggattg
gatagtttgatgaagggtgctgaggtgaagaaggagatggatttgctagagatgatcacc
caaggaattagtcactaa
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