Populus trichocarpa (black cottonwood): 7496835 Help Entry 7496835           CDS       T01077                                  Name (RefSeq) polygalacturonase At1g48100   KO K01184   polygalacturonase [EC:3.2.1.15] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop00040   Pentose and glucuronate interconversions pop01100   Metabolic pathways Module pop_M00081   Pectin degradation Brite KEGG Orthology (KO) [BR:pop00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     7496835 Enzymes [BR:pop01000]  3. Hydrolases   3.2  Glycosylases    3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds     3.2.1.15  endo-polygalacturonase      7496835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD Motif Other DBs NCBI-GeneID:  7496835 NCBI-ProteinID:  XP_024465344 LinkDB All DBs Position 1:complement(35823290..35826098) Genome browser AA seq 486 aa AA seqDB search MNFFNLKNYSLIILNIVLFLWTSRFETCHAREGHQWRLKGKFPPAHSVLNVEKEKGHGST AGSSHQHHGRSAMSKFAGNNYMLADDTMSTQQEGSSKAFNVLEFGAKGDGKTDDSEAFGA TWAAACKVEASTMIVPSGYVFLLHSVSFSGPGCEADIVFQLDGKIIAPTTPGAWKSGLLQ WIEFTKLNGITIQGKGIIDGQGSVWWNNLPTNNLEDSEGVMNAKMPGTKPTALRFYGSTR VIVTGITIQNSPQTHLKFDDCTTVQVSDFKAASPENSPNTDGIHLENSHDVLIYSSDLAC GDDCVSIQTGCSQVYIHNVNCGPGHGISIGGLGRDNSKACVSNVTVRDVAMLNTLTGVRI KTWQGGSGSVQGVTFSNIQVSGVKTPIMIDQFYCDRSKCQNESSAVAVSDINYINIKGTY ASKPVHLACSDDLPCTGISFSAIELNPVQEDSQPFCWNTFGELRSTTVPPINCLKMGKSR KPVVNC NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt atgaattttttcaatctcaaaaactactctctaatcatcctcaacattgttctgtttctt tggacttcaaggtttgagacttgccatgctagagaaggccatcagtggaggttaaaaggc aaattcccccctgcacactctgtgctaaatgtggagaaagaaaaaggtcacggtagcact gctggtagcagccatcagcaccatggtcgcagtgccatgtcgaagtttgctggtaataac tacatgttggctgacgataccatgtcaacacagcaagaagggagctctaaagcttttaat gtgttggaatttggtgccaaaggtgatggaaagacagatgactcagaggcatttggggca acgtgggcagctgcttgtaaagtggaggcatcgacgatgatagttccatctggatatgtt ttccttctccattcggtatctttttcaggtcctggttgtgaagctgacattgtatttcag ttggatggtaagatcatagctcctactactcctggagcttggaaatccgggcttttacaa tggattgagttcaccaaactgaatggaattactattcaaggtaaaggcattattgatgga cagggttcagtctggtggaacaacttgccaacaaataatcttgaagactcagagggtgtt atgaatgcaaaaatgccaggaaccaagccaacggctctaagattttatggaagtactcgt gtgatagttaccggcatcacaatccaaaacagtcctcaaacccacctcaaattcgacgat tgcacaactgttcaagtttctgatttcaaagcagcatcacctgagaacagccctaacaca gatggaatccatctggagaactcccatgacgtgctcatttacagttccgatcttgcttgt ggggatgactgtgtatctatacagacaggatgctcacaggtgtatatacacaatgttaac tgcggaccaggacatggaattagtattggagggctgggaagagataacagcaaggcctgc gtttcaaacgtgactgtccgagacgtagcaatgctcaatactttaactggtgtcagaata aagacatggcagggaggctctggctcagtacaaggagtcactttctcaaacatacaagtt agtggagttaaaacaccaatcatgatcgaccagttctactgtgacaggagcaaatgccag aatgaatcttcagctgtggctgtgtcagacataaactacataaatataaaaggcacatac gcatcaaaacctgtacacttagcatgcagtgatgacctgccatgcactggaatatcgttt tctgccatagaactaaatccagttcaagaagacagccaacctttctgttggaacacattc ggggaactgagaagcaccactgttccgccaattaactgcttaaaaatgggcaaatcaaga aaacccgttgtcaattgctga

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