Populus trichocarpa (black cottonwood): 7496841
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Entry
7496841 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7496841
KO
K11790
denticleless
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7496841
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
7496841
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Gene cluster
GFIT
Motif
Pfam:
WD40
MIOS_WD40
DUF2415
Nup160
WDR54
Motif
Other DBs
NCBI-GeneID:
7496841
NCBI-ProteinID:
XP_002300052
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All DBs
Position
1:35662868..35666635
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AA seq
503 aa
AA seq
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MERSSRSKSLFRDMRSRELGGFRKRRFITQMGSDFTEMGSVTVEHNGEETPPLSVSFCKT
SKYSHILAVSDEDGYVSMFDTRTEFPSEKARISDWVAHQNAIFDVCWIKEDTNILTASGD
QTIKVWDAQEKKCTGILMGHTGSVKSLSPHPTNSDLLISASRDGSFAIWDLRCKTTSKTR
CSEAHVAPAAMVQGAHLSSRAKRVRRGKAASMSITSVLYLKDEVSIATAGAADSIVKFWD
TRNLKVQVTQASPNIKSSTEKERRLHGISSLSQDLNGVFLTATCMDNRIYLYNVLQLDKG
PMRSFSGCRIESFYVKSTISPDAAHILSGSSDGNAYIWQVNKPDVDPITLKTHDGEVTAV
DWCPSEVGKIATSSDDFTVRIWNINSSYCSSTTRSPSAIRRRVMAIPREECRELLMNDER
IDPTKVPDNLLPSDEVFNQNNPPIPITMPTISTPEAHKKKFSLDSDSKETFEKTPEAAMK
SPSSVLNPPSSLKRTIRDYFLAA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtctagcagatctaaatcactgtttcgagacatgaggtcaagagagctgggt
ggttttagaaaacggcgctttattacccaaatgggatccgatttcactgaaatgggatcg
gtgacggtcgaacataacggcgaggaaacgccaccactgtctgtctctttttgcaagaca
agtaaatattcacatattttggcggtgtcggacgaggatggctatgtgagcatgtttgat
actcgtaccgaattcccttctgagaaagcaagaatcagtgactgggtagctcaccagaac
gccatctttgatgtttgttggattaaggaagataccaacatactcacagcttcaggcgat
caaactataaaggtatgggatgcacaagagaagaaatgtactggaatattgatggggcac
acaggaagtgttaaatctctgtctccccatccaacaaattcggatcttcttatctcggct
tccagagacgggtcatttgctatctgggatttgagatgcaagacaacttccaaaactaga
tgcagtgaagcacatgtcgctccagctgccatggtccaaggagctcatctttcttctcga
gcaaagcgggtcaggcgtggcaaggctgcttcgatgagcattacatcagttctttatctt
aaagacgaggtatccattgccactgctggagcagcagacagcattgttaaattctgggat
actagaaatctaaaggttcaggtcactcaggcatcccctaatatcaagtcatcaactgag
aaggaaagaagattacatggcatatctagtctgtcccaggatttaaatggcgtgtttctt
acagctacatgcatggacaatagaatatacttgtataatgtacttcagcttgataagggt
ccgatgcggtcattttctggatgtcggatagaatcattctatgtaaagtcaacaatcagt
cctgacgcagctcacatactcagtggctctagtgatggaaacgcctacatatggcaggtg
aacaagcccgatgtggatcccatcacattgaaaactcatgatggagaggttacagcagta
gattggtgtccatctgaggttgggaagatagcaacttcttcagatgattttacagttcgc
atctggaacattaatagcagttattgttcaagcacaacaagatctccatctgccattcga
aggagggtaatggcaatcccaagagaggaatgtagagaacttttgatgaatgatgaacga
attgatccaacaaaggttcctgacaatctgcttccttctgatgaagtgttcaaccaaaat
aacccacctattcctataacaatgcccacaattagtacccctgaagcccataagaaaaag
ttttcactagattctgattctaaagaaacttttgagaaaacccctgaagcagcgatgaag
agcccctcttctgtattgaaccctccttcttctttaaaaagaactatcagagattacttt
ctagcagcttaa
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