Populus trichocarpa (black cottonwood): 7496889
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Entry
7496889 CDS
T01077
Name
(RefSeq) probable alpha-amylase 2
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
7496889
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
7496889
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
DUF5106
Motif
Other DBs
NCBI-GeneID:
7496889
NCBI-ProteinID:
XP_002301935
UniProt:
B9GQ54
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Position
2:complement(887078..891472)
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AA seq
410 aa
AA seq
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MVYNSNGNDQQTDNGAVLRSGREILLQAFNWESHKHDWWRKLEKKVADIAKSGFTTAWLP
PPTNSFAPEGYLPQNLYNLNSSYGSEQLLKALLEKMKQYNVRAMADIVINHRVGTTQGHG
GMYNRYDGVPLSWDERAVTSCTGGLGNRSTGDNFNGVPNIDHTQHFVRKDITAWLQWLRK
NVGFQDFRFDFARGYSPKYVKEYIEGAKPIFSVGEYWDSCNYNGHFLEYNQDSHRQRIVN
WIDLTGQLSAAFDFTTKGILQEAVKGQFWRLRDPQGKPPGVLGWWPSRAVTFIDNHDTGS
TQAHWPFPSDHIMEGYAYLLTHPGMPTVFYDHFYDWGNSIHEQIVKLIDIRKHQDIHSRS
SIRIFEAQPNLYSAIIGEKVCMKIGDGSWCPAGKEWTLATSGHRYAVWQK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtttacaacagtaatggaaacgaccagcagactgataatggagctgtgctgcggagc
ggaagagaaatccttcttcaggcttttaactgggagtcacataagcatgactggtggaga
aaattggagaagaaagttgctgatattgcgaaatctgggtttaccacagcatggttgccg
ccgcctactaactccttcgcacccgaaggttatcttccacagaacctttataacctcaac
tcttcatatggttccgagcaactcttaaaggctttacttgaaaagatgaagcagtacaat
gttagagcaatggctgacattgttatcaatcaccgggttggaacaacgcaagggcacggt
ggaatgtacaatcgttatgatggagttccattatcgtgggatgaacgtgctgttacatct
tgtactggtggattgggtaatcgaagcactggtgacaacttcaatggggttccaaatatt
gaccatactcaacattttgttcgaaaagacataactgcatggctgcagtggttacgtaag
aatgttggctttcaggatttccgttttgattttgcaagaggttattctccaaaatatgtg
aaagaatacattgaaggagcgaagcccatattttcagttggagagtactgggattcttgc
aattacaatggccattttttggaatacaaccaagacagccataggcagcggatagtcaat
tggattgatttaacaggccagctctcagctgcatttgacttcacaacaaagggaattctt
caggaagctgtaaaggggcaattctggcgtctgcgtgacccgcaaggaaagccaccaggt
gtattgggatggtggccctcgagggctgtcacattcattgataaccatgacacaggctca
acacaggctcattggcctttcccttcggatcatattatggagggttatgcttacttgctt
acacatccagggatgccgacagttttctacgatcacttctatgactggggtaattctatt
catgagcagattgtgaaattgattgacattcggaagcatcaagatatccacagccgatca
tctatcaggatttttgaggcccagccaaacctttattctgcaattattggtgagaaggtg
tgcatgaagattggggatggttcctggtgcccagcgggtaaggagtggacgcttgcaacc
tctggccaccgatatgccgtgtggcaaaaataa
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