Populus trichocarpa (black cottonwood): 7496941 Help Entry 7496941           CDS       T01077                                  Name (RefSeq) cyclin-dependent kinase D-2   KO K02202   cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03022   Basal transcription factors pop03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     7496941   09124 Replication and repair    03420 Nucleotide excision repair     7496941  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:pop01001]     7496941   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pop03021]     7496941    03019 Messenger RNA biogenesis [BR:pop03019]     7496941    03400 DNA repair and recombination proteins [BR:pop03400]     7496941 Enzymes [BR:pop01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.22  cyclin-dependent kinase      7496941     2.7.11.23  [RNA-polymerase]-subunit kinase      7496941 Protein kinases [BR:pop01001]  Serine/threonine kinases: CMGC group   CDK family    7496941 Transcription machinery [BR:pop03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      7496941 Messenger RNA biogenesis [BR:pop03019]  Eukaryotic type   mRNA processing factors    5' end processing     Capping factors      7496941 DNA repair and recombination proteins [BR:pop03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      7496941 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7 RTC Motif Other DBs NCBI-GeneID:  7496941 NCBI-ProteinID:  XP_024440116 LinkDB All DBs Position 14:complement(5113695..5120044) Genome browser AA seq 416 aa AA seqDB search MSENDGEKKVADRYLKREILGEGTYGVVYKAIDTKTGKTVAIKKIRLGRQKEGVNFTALR EIKLLKELKDPNIIELIHAFPHKGNLHLVFEFMETDLEAVIRDPNIFLSPGDIKSYFQMT LKGLAVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAP ELLFGAKQYGASVDVWAAGCIFAELLNRRPFLQGDSDIDQLGKIFQKLGTPTPLQWPDLE WLPDFVEYSSQIIQPWRKLCPTASDDALDLLSKMFTYDPRARISVQQALEHRYFTSIPLP TDPAKLPRPAPKRESHNPRTSDVHDGPVVLSPKRKARRVMSDREGFAGNSFQVDKVDECG GEIRQAAGDNTGRNEPVLMSVDFSVFGSKPMSRPTINSADRSHLKRKLDLEFQHPE NT seq 1251 nt NT seq  +upstreamnt  +downstreamnt atgtcagagaatgatggggagaagaaagtagcggatagatatctaaagcgagagattctt ggtgaaggtacatatggtgttgtctacaaagccattgatactaagactgggaagactgtt gcaatcaagaaaattcggctcggaagacaaaaggaaggagtgaattttacagcacttaga gagattaaacttcttaaagagcttaaagacccgaatataatcgagttgatccatgccttc cctcacaaagggaacttgcatcttgtgtttgagttcatggagactgatcttgaagcggtg attcgcgatcccaatatatttctttcgccaggggatataaaatcatactttcagatgacg ttgaaaggactagctgtttgccataagaaatgggttttgcatagggatatgaagccaaat aacttgttgataggatctaatgggcagctcaagcttgcagattttggtttagcacgtatt tttggaagtcctggtcgcaagttcacacaccaagtctttgctcgatggtatagagcacct gaacttttgtttggtgccaaacaatatggtgctagtgttgatgtatgggctgcaggttgt atatttgcagagctactgaatcgcagaccattcctacagggggatagcgatatcgatcaa ctaggaaagatctttcagaagttggggactccaactcctttgcagtggcctgatttggaa tggcttcctgattttgtagaatattcatctcagattatacaaccttggcgaaaactgtgt ccaacggctagtgacgatgctttagatctgttatctaagatgtttacatatgatccaaga gctagaatttcagtgcaacaggcattggaacacaggtatttcacctccatacctctgccc acagatccagctaagctccctagaccagctcccaagagagaatcacacaatcctaggact tcagatgtacatgatggtcctgttgtcttgtcaccaaaaaggaaggcaagaagagtgatg tcagatcgtgaagggtttgctggaaattcattccaagttgataaggttgatgaatgtggc ggtgagattagacaggcagctggggataacacgggcaggaatgaaccggtgctgatgtca gtagatttttctgtctttggatcaaaaccaatgagcagacctacgattaacagtgctgac agatctcatctaaagaggaaactggatcttgagttccagcatcctgaataa

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