Populus trichocarpa (black cottonwood): 7497285
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Entry
7497285 CDS
T01077
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7497285
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7497285
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
7497285
NCBI-ProteinID:
XP_002320649
UniProt:
B9IBT2
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All DBs
Position
14:complement(14041261..14044562)
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AA seq
519 aa
AA seq
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MVSFEQDKAEVLEGKRMVDVENSLRMKVSTASGEDTIVSSFGNQDMPLSVAVPQPKKKRN
LPGMPDPDAEVVALSPKSLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKE
PRKRVYVCPEPSCVHHNPVRALGDLTGIKKHFSRKHGEKKWKCERCSKKYAVQSDWKAHM
KTCGTREYKCDCGTLFSRRDSLITHRAFCDALTEESARAQTLATTGNEGNGCNVKCVVAS
PPPPPLTPSTSVVSPGLSVQSSELAENPIGLSPPTPAAICLNASATSTSSTSSTSNVFAS
IFASSTASPAAIPQLASPSAFPMFCGLARSDCPPTMPTPRAMDPPSLSLSPSVYLSNTTS
SLFPTDQDRRHYTPSPQPAMSATALLQKAAQMGATTSNPSFLRGLGFPPSTNQDGNGNQW
DMKPENNTTFAAGLGLVLPTSDVMMDSSSLFGNKPTTLDLLGLGLDAASSALLNYNGTGG
FNVGAAAAAAYGGGRRGNCEETWDGVPERKPNGSTATSL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtaagttttgaacaggacaaagctgaagttttggaaggaaagagaatggtggatgtt
gagaattcattaagaatgaaagtatctacagcttcaggagaggacacaattgtctcttca
tttggtaaccaggacatgccactctccgttgcagtgccacagccaaagaagaagcgaaat
ctccctggaatgccagatccagatgcagaagtagttgcgttatcaccaaagtctttatta
gctacaaacagattcgtgtgtgagatctgcaacaagggctttcaaagagaccagaacctg
caacttcacagacgaggccataacttaccatggaagctaaagcaacgaaccaacaaagag
ccaaggaaacgtgtctatgtgtgtccagagccatcttgtgtacatcacaacccagttaga
gctcttggggaccttactggcattaaaaaacacttcagcaggaagcacggtgagaaaaag
tggaagtgtgagagatgttcaaagaaatatgctgttcagtctgattggaaagctcacatg
aaaacttgtggcactagagagtataaatgcgattgtggcactttgttttcaaggagggat
agtcttataacacatagggcattctgtgatgcgttaacggaggagagtgcaagggcgcaa
accctagcgacaacggggaatgaagggaatggttgtaacgtcaagtgtgtggttgcttca
ccaccgcctccaccacttacgccgtctactagcgtggtgtctccgggtttgtcagttcaa
agctcagaattagcagaaaatccaattggactttcaccaccaacaccagcagctatatgc
ctgaatgcctcagctacaagcacaagctctactagctcaaccagtaatgtatttgctagt
atatttgcttcttcaacagcatcaccggctgctatcccccaactagcatcaccatctgcg
ttcccaatgttttgtggcttagctcgctctgattgtccccctactatgccaacacctaga
gcaatggatcccccatcactctctctttcaccatctgtttatctctccaacaccacctcc
tctctcttccccacagaccaagatcgtcgccattacacaccgtctccgcaaccggccatg
tctgccactgcattgcttcaaaaagcagcacaaatgggtgcaactacatcaaacccatca
tttctccgtggtttaggctttcccccgtcaactaatcaagacggcaatggcaatcaatgg
gatatgaagccagagaacaatactacttttgccgctgggcttggacttgtactccccact
agtgatgttatgatggattcatcttcgttgttcggaaacaagccaacaacactcgacctt
cttgggctcggcctggatgctgctagttctgctttgctaaactacaatggtactggtggc
tttaatgttggagcagcagcagccgctgcatatggtggtggaaggagagggaattgtgaa
gaaacatgggatggtgttcctgagagaaaacctaatggatccacagcaacctcactttag
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