Populus trichocarpa (black cottonwood): 7497387
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Entry
7497387 CDS
T01077
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7497387
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
7497387
NCBI-ProteinID:
XP_002319368
UniProt:
A9PGW8
B9I676
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Position
13:14227657..14231249
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AA seq
595 aa
AA seq
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MEPKNTNGSSRSYEHDIISWFEDISKKAGQVQTETLRRILELNWGVEYLNKWLGDINIQD
MDASALESLYTSLVPPASHADLEPYISRIADGDTVPLLTKQPITLLSLSSGTTDGRQKFV
PFTDHSARTTLQIFSLAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTAGTATTHYYA
SEEFKIKQEKTKCFTCSPQEVISGGDYEQSTYCHLLLGLFFCDQVEFITSTFAYSIVQAF
TAFEDVWRDICNDIKHGTLSERINLAKMRKAVLSIISPNPSLASKIEENCKELETQNWLG
LITKLWPNSKYVYSIMTGSMQPYLQKLRHYAGGLPLVSADYGSTESWIGANVDPYLPPED
VTFAVIPTFSYYEFMPLYRENHYCGSAIDDFIEDEPVPLSKVKVGQEYEIVLTTFTGLYR
CRLGDVVEVAGFHKGTPKLNFICRRKLILTINIDKNTEKDLQLVVEKGSQLLMSKARAEL
VDFTSHAELETQPGHYIIYWEIKGDVEEEVLGECCKKMDASFVDHGYVVSRRTKSIGPLE
LCIVKTGTFKKILEYFIGNGAALSQFKTPRCTSNHGLLKILNGSTIKRLYSTAYS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaaaaacaccaatggatcgtcaagaagctatgaacatgacattatcagttgg
tttgaggacatatcaaagaaagccggccaagttcagaccgagactcttcgccgaattctt
gagctcaactggggtgtggagtatctcaacaaatggttaggggatatcaatattcaagac
atggatgcaagtgcattggaatctctgtacacttctttggtacctcctgcttcccatgca
gatttagagccttacattagcagaattgctgatggggatactgttccgttactcactaaa
caacctataacacttctctccttaagctctggaaccacagacggaaggcagaagtttgtt
cctttcactgaccatagtgctcgaacaactcttcaaattttcagcttggcagcagcttat
agatcaagggtttatccaacaagggaaggaggaaggatccttgagttcatatacagcagc
aaacaattcaaaacaaaaggagggttaacagcaggaacagctacaacccattattatgca
agtgaagagtttaagatcaagcaagaaaaaacaaagtgcttcacttgtagtccacaagaa
gtcatttctggtggagactacgagcaatctacttattgtcatcttcttctaggcctcttc
ttctgtgatcaagtagagttcataacctctacttttgcttatagcatagttcaagccttc
acagcatttgaagatgtgtggagagacatatgcaatgacattaaacatggtactcttagt
gaaagaatcaacttggcaaagatgagaaaggctgtgctgtctatcatctctccaaatcca
agcttagcttcaaagatagaagaaaactgcaaggagttggagactcaaaattggcttggt
ttgattactaagctttggccaaattccaagtatgtttactccataatgacaggctcaatg
caaccttacttgcaaaaactaaggcattatgctgggggcttgccattagtgagtgctgat
tatggatcaacagagagttggattggagctaatgtggatccttatttgcctcctgaagat
gttacttttgcagtaataccaaccttctcatattatgagttcatgccactttatagagag
aatcattattgtggctcagccatcgatgacttcatcgaagatgaaccggtaccactctca
aaagtcaaggtaggacaagagtatgagattgtcctcactacttttactgggctttataga
tgcaggctaggggatgtagtggaggttgctggttttcacaaagggacaccaaaattgaac
tttatatgccggagaaagctaattttaactataaacattgacaagaacactgaaaaagat
ttgcagctggtggtggagaaggggtctcagctactcatgagcaaggctagagcagagctt
gtggattttactagccacgctgagttagaaacacagccaggtcactacataatttactgg
gaaatcaaaggagatgtcgaagaagaggttcttggtgagtgttgcaagaaaatggatgca
tcttttgttgatcatggctatgtggtgtcaagaagaaccaaatcaataggacctctagag
ctttgcattgtcaagacggggactttcaagaagatcttggaatatttcataggaaatggg
gcagcattgagccagttcaagactcctaggtgcaccagcaaccatggactgttgaaaatt
ctcaatggaagcaccattaaaaggctctacagcactgcttatagctag
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