Populus trichocarpa (black cottonwood): 7497394
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Entry
7497394 CDS
T01077
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7497394
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
7497394
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Gene cluster
GFIT
Motif
Pfam:
Gar1
SR-25
Motif
Other DBs
NCBI-GeneID:
7497394
NCBI-ProteinID:
XP_052302628
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All DBs
Position
13:14306320..14309734
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AA seq
699 aa
AA seq
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MVGFVSEPSTIKEEEEESNQVSKARNLEDPIDPFDQKLTNFADSFLDFDSIEEFFEGPER
FSLDFEKRMEMDDKGLVVKDLVVNVSDSVFEEKNGIVDGSDLGGLVKVKEERVELERGGS
LGCSIEEEMGRVSLVAELSLVVVDGGAKVVGDEAEIGNGGLMNGSGSDIGDGSGVNGKIV
SDEEESESESESESESESSSSSSSSDDDDGEQEEESDQEEEEKKVEVRMEVNKRLDGLGD
MEEGEIRDADGEEMVAGNDSEDEGEEEEEEVVEEEEDDGYKMVEWSDVDEEEDAATGEPI
RSKNEVQFLSPVPPVHASLELHHQMLPVGVVLSAIGPQVIVQGVEKHNPLNEGSILWITE
KRSPLGLVDEIFGPVKNPYYVVRYNSESEVPSGVLNGTLISFVPEFANHVLNVKNLHKKG
YDASGEYDEELTNETEFSDDEKEAEHKRMLKMSKRGVSDEKSGKNKNNRRKVKNRGGGWK
NNKPFGEQMPTGVDQLPPDQNLRNDSAVGTSLAPVPQTTGVYAPSNGVWTSMVPSQQPQA
LAIRGGFPSNNMPWPVQSQLQHPYQIPMANGMPIQQQFNPGQRSLPNALFAGGQPNFFAG
PAYPPPWPVVGGHYFNQAAFGTGFQVQPNPPAMNVVDQGMISTGPPLVHNCSFQPPAIPP
GNIQAPQQFNAGASSSHGRKPYRRGGGRFSGGRGRQPPN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtggggtttgtatctgaaccctccaccattaaagaagaagaagaagaaagcaaccaa
gtttcaaaagctagaaacttggaagacccaattgacccttttgatcaaaagctcacaaat
tttgctgattcttttcttgattttgattctatagaggagttttttgaaggcccagaaagg
tttagtttagattttgagaagagaatggagatggatgataaagggcttgttgttaaggac
ctggttgttaatgtttctgattcagttttcgaagaaaagaacggaattgttgatgggtct
gatctggggggtttggtgaaggtgaaggaagaaagagtggagcttgaaagaggagggagt
ttggggtgttctattgaggaggagatgggaagggttagtttggttgctgaactgagttta
gttgtggttgatgggggtgcaaaagttgtgggtgatgaggcagagataggtaatggtggt
ttgatgaatgggtcaggttcagatattggtgacggtagtggtgtgaatggtaaaatagtg
agtgatgaagaggagagcgaaagtgaaagcgagtctgaatcggagagtgaaagcagttca
tcttctagtagcagtgatgatgatgatggtgaacaagaagaggagagtgatcaggaagag
gaggagaagaaggtggaagttagaatggaagtaaataaaaggttagatggtttgggtgac
atggaagaaggtgagataagggatgctgatggagaggaaatggttgctgggaatgatagt
gaggatgagggtgaggaggaggaggaggaggtggtggaggaggaggaggacgatggatac
aagatggttgagtggagtgatgttgatgaggaggaggatgctgctacgggagagcctatt
aggtcgaagaacgaggttcagtttctctctcctgttcctcctgttcatgcttcattggaa
cttcatcatcagatgctacctgttggagttgttttgtcggctataggtccccaggttata
gtacaaggggtggaaaagcacaatcccttgaatgagggttctatcctgtggataactgaa
aagagatccccgttggggttggtagatgagatttttggacctgtcaaaaacccatactac
gtggtgagatacaattcagaaagtgaagtcccttctggggtccttaatggtactttgata
tcttttgttcctgagtttgccaatcatgtgctcaatgtcaagaatcttcacaagaaaggg
tatgatgcatctggtgaatacgatgaagagttaactaatgagacagaattttcagatgat
gagaaagaggcggagcacaagaggatgttaaaaatgtcaaagaggggagttagtgatgag
aaatctggaaaaaacaaaaacaatagaaggaaggtgaaaaataggggtggcggttggaag
aataataaaccttttggggagcaaatgccaactggtgtagatcagctaccacccgatcaa
aatttgcgtaatgactctgctgttggaacatcattggccccagtgcctcagacaactggt
gtttatgcaccttcaaatggtgtatggacgagtatggtaccatctcagcagcctcaagct
ttagcaattcgaggtgggtttccatctaataatatgccttggcctgtacagagtcaactt
cagcatccctatcagatacctatggcaaatggtatgccaattcagcaacagttcaatcct
ggtcagagatcacttcctaatgctttgttcgcaggcggacaaccaaatttctttgctgga
cctgcatatcctccaccatggcctgtagtgggaggacactactttaaccaagctgcattt
ggaacaggatttcaggttcaacctaatcctccagctatgaatgtggtagaccaaggaatg
atatccactggaccgcctttagtacataactgtagtttccaaccaccagccatccctcct
ggcaacatacaagctcctcagcaattcaatgcaggagcctcttccagccatggaagaaaa
ccttatcgtagagggggtggtcgtttttcaggtgggagaggtagacagccaccaaactga
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